| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.054] [SVM Score: 0.572719527777] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| GYP1 |
|
|
|
| GYP5 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| Golgi apparatus | 7.3441E-4 | 2 | 171 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| vesicle-mediated transport | 2.9119E-3 | 2 | 340 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| Rab GTPase activator activity | 1.0611E-6 | 2 | 7 | 2 | 6292 |
| Ras GTPase activator activity | 9.6001E-6 | 2 | 20 | 2 | 6292 |
| GTPase activator activity | 2.5061E-5 | 2 | 32 | 2 | 6292 |
| small GTPase regulator activity | 8.6451E-5 | 2 | 59 | 2 | 6292 |
| enzyme activator activity | 1.1171E-4 | 2 | 67 | 2 | 6292 |
| GTPase regulator activity | 1.7614E-4 | 2 | 84 | 2 | 6292 |
| nucleoside-triphosphatase regulator activity | 2.256E-4 | 2 | 95 | 2 | 6292 |
| enzyme regulator activity | 1.0773E-3 | 2 | 207 | 2 | 6292 |