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Protein Overview: YOR246C

General Information:
Name(s) found: YOR246C [SGD]
Description(s) found:
Found 25 descriptions.
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  • Protein with similarity to oxidoreductases, found in lipid particles; required for replication of Brome mosaic virus in S. cerevisiae, a model system for studying replication of positive-strand RNA viruses in their natural hosts [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 330 amino acids

    Gene Ontology:
    Cellular Component: lipid particle [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: oxidoreductase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDPRILPYY DPAVERKIAV VTGGNTGIGW YTVLHLYLHG FVVYICGRNS HKISKAIQEI  60
   61 LAEAKKRCHE DDDGSSPGAG PGPSIQRLGS LHYIHLDLTD LKCVERAALK ILKLEDHIDV 120
  121 LVNNAGIMAV PLEMTKDGFE VQLQTNYISH FIFTMRLLPL LRHCRGRIIS LSSIGHHLEF 180
  181 MYWKLSKTWD YKPNMLFTWF RYAMSKTALI QCTKMLAIKY PDVLCLSVHP GLVMNTNLFS 240
  241 YWTRLPIVGI FFWLLFQVVG FFFGVSNEQG SLASLKCALD PNLSVEKDNG KYFTTGGKES 300
  301 KSSYVSNNVD EAASTWIWTV HQLRDRGFDI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YOR246C and ERG6 Huh WK, et al. (2003)
    View Data YOR246C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..330] PSI-BLAST 79.917458 Carbonyl reductase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • retinol dehydrogenase activity
    		•  2.50453100919665 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • retinoid binding
    		•  1.72614743805853 bayes_pls_golite062009
  • isoprenoid binding
    		•  1.61095405873981 bayes_pls_golite062009
  • alcohol dehydrogenase (NAD) activity
    		•  0.867909552357575 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.82673050487418 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.824879127880521 bayes_pls_golite062009
  • 3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity
    		•  0.665447800395781 bayes_pls_golite062009
  • binding
    		•  0.355184540089764 bayes_pls_golite062009
  • retinol binding
    		•  0.343379136183648 bayes_pls_golite062009
  • alcohol dehydrogenase activity, zinc-dependent
    		•  0.311551606659739 bayes_pls_golite062009
  • NADPH:quinone reductase activity
    		•  0.0822919343613215 bayes_pls_golite062009
  • ethanol binding
    		•  0.0448614072391299 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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