Protein Overview: gi|71043636, gi|...

General Information:
Name(s) found:	gi\|71043636 [NCBI NR] gi\|68533827 [NCBI NR] gi\|34878783 [NCBI NR] gi\|149037249 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|71043636\|ref\|NP_001020887.1\| vacuolar protein sorting 4 homolog B [Rattus norvegicus] [NCBI NR] gi\|68533827\|gb\|AAH99128.1\| Vacuolar protein sorting 4 homolog B (S. cerevisiae) [Rattus norvegicus] [NCBI NR] ref\|XP_341108.1\| similar to SKD1 [Rattus norvegicus] [NCBI NR] gi\|149037249\|gb\|EDL91749.1\| vacuolar protein sorting 4b (yeast) [Rattus norvegicus] [NCBI NR] similar to SKD1 [HMR_022704-rand.fasta] similar to SKD1 [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Vacuolar protein sorting 4b [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Tax_Id=10116 PREDICTED: similar to SKD1 [EBI-IPI_rat_3.08_07-12-2005_origrev_con.fasta] Tax_Id=10116 Similar to SKD1 [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta] vacuolar protein sorting 4b [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] vacuolar protein sorting 4b (yeast) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Vacuolar protein sorting 4b (yeast) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 SIMILAR TO SKD1 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] vacuolar protein sorting 4 homolog B [Rattus norvegicus] [NCBI-RefSeq_human-rat_na_04-07-2009_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Vps4b Vacuolar protein sorting 4b [rat-ipi-250309-contam.fasta] Vacuolar protein sorting 4 homolog B (S. cerevisiae) OS=Rattus norvegicus GN=Vps4b [011711_HMR.fasta] Vacuolar protein sorting 4 homolog B (S. cerevisiae) OS=Rattus norvegicus GN=Vps4b PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta] Protein Vps4b OS=Rattus norvegicus GN=Vps4b PE=2 SV=1 [Aridor_1205.fasta] Protein Vps4b OS=Rattus norvegicus GN=Vps4b PE=1 SV=1 [RAT.fasta.20160308]
Organism:	Rattus norvegicus
Length:	444 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN][IEA] early endosome [UNKNOWN][IEA] endosome [UNKNOWN] cytoplasm [UNKNOWN][IEA] late endosome [UNKNOWN][IEA] cytosol [UNKNOWN][IEA] endosome membrane [UNKNOWN][IEA] vacuolar membrane [UNKNOWN][IEA] cellular_component [ND] lysosome [UNKNOWN][IEA]
Biological Process:	potassium ion transport [UNKNOWN][IEA] biological_process [ND] endosome organization [UNKNOWN][IEA] ATP catabolic process [UNKNOWN][IEA] endosome transport [UNKNOWN][IEA] intracellular cholesterol transport [UNKNOWN][IEA] endosome to lysosome transport via multivesicular body sorting pathway [UNKNOWN][IEA] response to lipid [UNKNOWN][IEA] cholesterol transport [UNKNOWN]
Molecular Function:	nucleotide binding [IEA] ATPase activity [UNKNOWN] ATP binding [UNKNOWN][IEA] protein binding [UNKNOWN] protein C-terminus binding [UNKNOWN][IEA] nucleoside-triphosphatase activity [IEA] molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTNTNLQK AIDLASKAAQ EDKAGNYEEA LQLYQHAVQY FLHVVKYEAQ GDKAKQSIRA  60
   61 KCTEYLDRAE KLKEYLKKKE KKPQKPMKEE QSGPVDEKGN DSDGEAESDD PEKKKLQNQL 120
  121 QGAIVIERPN VKWSDVAGLE GAKEALKEAV ILPIKFPHLF TGKRTPWRGI LLFGPPGTGK 180
  181 SYLAKAVATE ANNSTFFSIS SSDLVSKWLG ESEKLVKNLF QLARENKPSI IFIDEIDSLC 240
  241 GSRSENESEA ARRIKTEFLV QMQGVGVDND GILVLGATNI PWVLDSAIRR RFEKRIYIPL 300
  301 PEAHARAAMF RLHLGSTQNS LTEADFQELG RKTDGYSGAD ISIIVRDALM QPVRKVQSAT 360
  361 HFKKVRGPSR ADPNCIVNDL LTPCSPGDPG AIEMTWMDVP GDKLLEPVVS MWDMLRSLSS 420
  421 TKPTVNEQDL LKLKKFTEDF GQEG

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: gi|71043636, gi|...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: