Description(s) found:
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gi|45554544|ref|NP_996381.1| CG11265, isoform E [Drosophila melanogaster]
[NCBI NR]
gi|45446864|gb|AAS65290.1| CG11265, isoform E [Drosophila melanogaster]
[NCBI NR]
gi|33636605|gb|AAQ23600.1| RE04457p [Drosophila melanogaster]
[NCBI NR]
gi|161077643|ref|NP_996382.2| CG11265, isoform C [Drosophila melanogaster]
[NCBI NR]
gi|158031751|gb|AAS65289.2| CG11265, isoform C [Drosophila melanogaster]
[NCBI NR]
type=protein; loc=X:join(8457406..8458408,8458517..8459197,8459410..8460089,8460330..8460971); ID=FBpp0304114; name=Trf4-1-PJ; parent=FBgn0030049,FBtr0331725; dbxref=REFSEQ:NP_001259340,GB_protein:AGB95183,FlyBase:FBpp0304114,FlyBase_Annotation_IDs:CG11265-PJ; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r5.56; species=Dmel;
[FlyBase]
type=protein; loc=X:join(8457406..8458408,8458517..8459197,8459410..8460089,8460330..8460971); ID=FBpp0304113; name=Trf4-1-PI; parent=FBgn0030049,FBtr0331724; dbxref=REFSEQ:NP_572490,GB_protein:AAF46390,FlyBase:FBpp0304113,FlyBase_Annotation_IDs:CG11265-PI; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r5.56; species=Dmel;
[FlyBase]
type=protein; loc=X:join(8457406..8458408,8458517..8459197,8459410..8460089,8460330..8460971); ID=FBpp0304112; name=Trf4-1-PH; parent=FBgn0030049,FBtr0331723; dbxref=REFSEQ:NP_996383,GB_protein:AAS65288,FlyBase:FBpp0304112,FlyBase_Annotation_IDs:CG11265-PH; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r5.56; species=Dmel;
[FlyBase]
This gene is referred to in FlyBase by the symbol Dmel\Trf4-1 (CG11265, FBgn0030049). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:8454668..8461653. It has the cytological map location 7F4. There is experimental evidence that it has the molecular function</span>: polynucleotide adenylyltransferase activity. There is experimental evidence that it is involved in the biological process</span>: ncRNA polyadenylation during polyadenylation-dependent ncRNA catabolic process. 12 alleles are reported. The phenotypes of these alleles are annotated with: eye; wing. It has 4 annotated transcripts and 4 annotated polypeptides.
[FlyBase]
(AAS65290) CG11265-PE
[DrosMelano7227.FASTAC.txt]
CG11265-PE, isoform E [Drosophila melanogaster]gi|33636605|gb|AAQ23600.1| RE04457p [Drosophila melanogaster]gi|45554544|ref|NP_996381.1| CG11265-PE [Drosophila melanogaster]
[nrdb_11152004_Chlamydomonas]
type=protein; loc=X:join(8457406..8458408,8458517..8459197,8459410..8460089,8460330..8460971); ID=FBpp0071158; name=CG11265-PC; parent=FBgn0030049,FBtr0071212; dbxref=FlyBase:FBpp0071158,FlyBase_Annotation_IDs:CG11265-PC,GB_protein:AAS65289.1,GB_protein:A
[fly-100309-contam.fasta]
type=protein; loc=X:join(8457406..8458408,8458517..8459197,8459410..8460089,8460330..8460971); ID=FBpp0071159; name=CG11265-PE; parent=FBgn0030049,FBtr0071213; dbxref=FlyBase:FBpp0071159,FlyBase_Annotation_IDs:CG11265-PE,GB_protein:AAS65290.1,REFSEQ:NP_99
[fly-100309-contam.fasta]
CG11265-PE, isoform E [Drosophila melanogaster]
[nr-271106-contam.fasta]
RE04457p [Drosophila melanogaster]
[nr-271106-contam.fasta]
type=protein; loc=X:join(8457406..8458408,8458517..8459197,8459410..8460089,8460330..8460971); ID=FBpp0071158; name=CG11265-PC; parent=FBgn0030049,FBtr0071212; dbxref=FlyBase:FBpp0071158,FlyBase_Annotation_IDs:CG11265-PC,GB_protein:AAS65289.1,GB_protein:AAS65289,REFSEQ:NP_996382,GB_protein:AAS65289; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=X:join(8457406..8458408,8458517..8459197,8459410..8460089,8460330..8460971); ID=FBpp0071159; name=CG11265-PE; parent=FBgn0030049,FBtr0071213; dbxref=FlyBase:FBpp0071159,FlyBase_Annotation_IDs:CG11265-PE,GB_protein:AAS65290.1,REFSEQ:NP_996381,GB_protein:AAS65290; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=X:join(8457406..8458408,8458517..8459197,8459410..8460089,8460330..8460971); ID=FBpp0071158; name=Trf4-1-PC; parent=FBgn0030049,FBtr0071212; dbxref=FlyBase:FBpp0071158,FlyBase_Annotation_IDs:CG11265-PC,GB_protein:AAS65289.1,GB_protein:AAS65289,REFSEQ:NP_996382,GB_protein:AAS65289; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
type=protein; loc=X:join(8457406..8458408,8458517..8459197,8459410..8460089,8460330..8460971); ID=FBpp0071159; name=Trf4-1-PE; parent=FBgn0030049,FBtr0071213; dbxref=FlyBase:FBpp0071159,FlyBase_Annotation_IDs:CG11265-PE,GB_protein:AAS65290.1,REFSEQ:NP_996381,GB_protein:AAS65290; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
RE04457p OS=Drosophila melanogaster GN=Trf4-1 PE=1 SV=1
[UniProt_drosophila_07-01-2011_reversed.fasta]
type=protein; loc=X:join(8457406..8458408,8458517..8459197,8459410..8460089,8460330..8460971); ID=FBpp0071158; name=Trf4-1-PC; parent=FBgn0030049,FBtr0071212; dbxref=FlyBase:FBpp0071158,FlyBase_Annotation_IDs:CG11265-PC,GB_protein:AAS65289.1,GB_protein:AAS65289,REFSEQ:NP_996382,GB_protein:AAS65289; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=X:join(8457406..8458408,8458517..8459197,8459410..8460089,8460330..8460971); ID=FBpp0071159; name=Trf4-1-PE; parent=FBgn0030049,FBtr0071213; dbxref=FlyBase:FBpp0071159,FlyBase_Annotation_IDs:CG11265-PE,GB_protein:AAS65290.1,REFSEQ:NP_996381,GB_protein:AAS65290,FlyMine:FBpp0071159,modMine:FBpp0071159; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=X:join(8457406..8458408,8458517..8459197,8459410..8460089,8460330..8460971); ID=FBpp0304112; name=Trf4-1-PH; parent=FBgn0030049,FBtr0331723; dbxref=FlyBase:FBpp0304112,FlyBase_Annotation_IDs:CG11265-PH; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=X:join(8457406..8458408,8458517..8459197,8459410..8460089,8460330..8460971); ID=FBpp0304113; name=Trf4-1-PI; parent=FBgn0030049,FBtr0331724; dbxref=FlyBase:FBpp0304113,FlyBase_Annotation_IDs:CG11265-PI; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=X:join(8457406..8458408,8458517..8459197,8459410..8460089,8460330..8460971); ID=FBpp0304114; name=Trf4-1-PJ; parent=FBgn0030049,FBtr0331725; dbxref=FlyBase:FBpp0304114,FlyBase_Annotation_IDs:CG11265-PJ; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
RE04457p OS=Drosophila melanogaster GN=Trf4-1 PE=2 SV=1
[UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0071158; name=Trf4-1-PC; parent=FBgn0030049,FBtr0071212; dbxref=FlyBase:FBpp0071158,FlyBase_Annotation_IDs:CG11265-PC,GB_protein:AAS65289.1,GB_protein:AAS65289,REFSEQ:NP_996382,GB_protein:AAS65289; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0071159; name=Trf4-1-PE; parent=FBgn0030049,FBtr0071213; dbxref=FlyBase:FBpp0071159,FlyBase_Annotation_IDs:CG11265-PE,GB_protein:AAS65290.1,REFSEQ:NP_996381,GB_protein:AAS65290,FlyMine:FBpp0071159,modMine:FBpp0071159; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0304112; name=Trf4-1-PH; parent=FBgn0030049,FBtr0331723; dbxref=REFSEQ:NP_996383,GB_protein:AAS65288,FlyBase:FBpp0304112,FlyBase_Annotation_IDs:CG11265-PH; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0304113; name=Trf4-1-PI; parent=FBgn0030049,FBtr0331724; dbxref=REFSEQ:NP_572490,GB_protein:AAF46390,FlyBase:FBpp0304113,FlyBase_Annotation_IDs:CG11265-PI; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0304114; name=Trf4-1-PJ; parent=FBgn0030049,FBtr0331725; dbxref=REFSEQ:NP_001259340,GB_protein:AGB95183,FlyBase:FBpp0304114,FlyBase_Annotation_IDs:CG11265-PJ; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0071158; name=Trf4-1-PC; parent=FBgn0030049,FBtr0071212; dbxref=FlyBase:FBpp0071158,FlyBase_Annotation_IDs:CG11265-PC,GB_protein:AAS65289.1,GB_protein:AAS65289,REFSEQ:NP_996382,GB_protein:AAS65289; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0071159; name=Trf4-1-PE; parent=FBgn0030049,FBtr0071213; dbxref=FlyBase:FBpp0071159,FlyBase_Annotation_IDs:CG11265-PE,GB_protein:AAS65290.1,REFSEQ:NP_996381,GB_protein:AAS65290,FlyMine:FBpp0071159,modMine:FBpp0071159; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0304112; name=Trf4-1-PH; parent=FBgn0030049,FBtr0331723; dbxref=REFSEQ:NP_996383,GB_protein:AAS65288,FlyBase:FBpp0304112,FlyBase_Annotation_IDs:CG11265-PH; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0304113; name=Trf4-1-PI; parent=FBgn0030049,FBtr0331724; dbxref=REFSEQ:NP_572490,GB_protein:AAF46390,FlyBase:FBpp0304113,FlyBase_Annotation_IDs:CG11265-PI; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0304114; name=Trf4-1-PJ; parent=FBgn0030049,FBtr0331725; dbxref=REFSEQ:NP_001259340,GB_protein:AGB95183,FlyBase:FBpp0304114,FlyBase_Annotation_IDs:CG11265-PJ; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
FBpp0071158 type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0071158; name=Trf4-1-PC; parent=FBgn0030049,FBtr0071212; dbxref=FlyBase:FBpp0071158,FlyBase_Annotation_IDs:CG11265-PC,GB_protein:AAS65289.1,GB_protein:AAS65289,REFSEQ:NP_996382,GB_protein:AAS65289; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
FBpp0071159 type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0071159; name=Trf4-1-PE; parent=FBgn0030049,FBtr0071213; dbxref=FlyBase:FBpp0071159,FlyBase_Annotation_IDs:CG11265-PE,GB_protein:AAS65290.1,REFSEQ:NP_996381,GB_protein:AAS65290,FlyMine:FBpp0071159,modMine:FBpp0071159; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
FBpp0304112 type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0304112; name=Trf4-1-PH; parent=FBgn0030049,FBtr0331723; dbxref=REFSEQ:NP_996383,GB_protein:AAS65288,FlyBase:FBpp0304112,FlyBase_Annotation_IDs:CG11265-PH; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
FBpp0304113 type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0304113; name=Trf4-1-PI; parent=FBgn0030049,FBtr0331724; dbxref=REFSEQ:NP_572490,GB_protein:AAF46390,FlyBase:FBpp0304113,FlyBase_Annotation_IDs:CG11265-PI; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
FBpp0304114 type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0304114; name=Trf4-1-PJ; parent=FBgn0030049,FBtr0331725; dbxref=REFSEQ:NP_001259340,GB_protein:AGB95183,FlyBase:FBpp0304114,FlyBase_Annotation_IDs:CG11265-PJ; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
[fly-122215-dmel-6-09-contam.fasta]
type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0071158; name=Trf4-1-PC; parent=FBgn0030049,FBtr0071212; dbxref=FlyBase:FBpp0071158,FlyBase_Annotation_IDs:CG11265-PC,GB_protein:AAS65289.1,GB_protein:AAS65289,REFSEQ:NP_996382,GB_protein:AAS65289,UniProt/TrEMBL:Q7KVS9; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0071159; name=Trf4-1-PE; parent=FBgn0030049,FBtr0071213; dbxref=FlyBase:FBpp0071159,FlyBase_Annotation_IDs:CG11265-PE,GB_protein:AAS65290.1,REFSEQ:NP_996381,GB_protein:AAS65290,UniProt/TrEMBL:Q7KVS9,FlyMine:FBpp0071159,modMine:FBpp0071159; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0304112; name=Trf4-1-PH; parent=FBgn0030049,FBtr0331723; dbxref=REFSEQ:NP_996383,GB_protein:AAS65288,FlyBase:FBpp0304112,FlyBase_Annotation_IDs:CG11265-PH,UniProt/TrEMBL:Q7KVS9; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0304113; name=Trf4-1-PI; parent=FBgn0030049,FBtr0331724; dbxref=REFSEQ:NP_572490,GB_protein:AAF46390,FlyBase:FBpp0304113,FlyBase_Annotation_IDs:CG11265-PI,UniProt/TrEMBL:Q7KVS9; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
type=protein; loc=X:join(8563373..8564375,8564484..8565164,8565377..8566056,8566297..8566938); ID=FBpp0304114; name=Trf4-1-PJ; parent=FBgn0030049,FBtr0331725; dbxref=REFSEQ:NP_001259340,GB_protein:AGB95183,FlyBase:FBpp0304114,FlyBase_Annotation_IDs:CG11265-PJ,UniProt/TrEMBL:Q7KVS9; MD5=3ba34bb6103727640d68db3cdd2274f3; length=1001; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
|