YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: sdk-PC

General Information:
Name(s) found: sdk-PC / FBpp0070126 [FlyBase]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • The gene sidekick is referred to in FlyBase by the symbol Dmel\sdk (CG5227, FBgn0021764). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:580873..643529. It has the cytological map location 1C2-1C3. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: negative regulation of photoreceptor cell differentiation; compound eye cone cell differentiation; pigment cell differentiation. 28 alleles are reported. The phenotypes of these alleles are annotated with: photoreceptor; eye; interommatidial bristle; cone cell; lens; ommatidium; mystery cell; pigment cell. It has 6 annotated transcripts and 6 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 2232 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKSAASSLR RRRPKTTITA TLAIEMPSQP KLASLLAVLV LLCYCDSCFF CYADANLQQQ  60
   61 NSIVQQQQLQ APRFTTHPSS SGSIVSEGST KILQCHALGY PQPTYRWLKD GVPVGDFSSS 120
  121 QFYRFHSTRR EDAGSYQCIA RNDAGSIFSE KSDVVVAYMG IFENTTEGRL TVISGHPAIF 180
  181 DMPPIESIPV PSVMWQSEDG PLNYDIKYAF THANQLIILS ADENDRKGYR AKAINTQLGK 240
  241 EESSAFVHLN VSGDPYIEVA PEIIVRPQDV KVKVGTGVVE LQCIANARPL HELETLWLKD 300
  301 GLAVETAGVR HTLNDPWNRT LALLQANSSH SGEYTCQVRL RSGGYPAVSA SARLQILEPP 360
  361 LFFTPMRAET FGEFGGQVQL TCDVVGEPTP QVKWFRNAES VDAHIESGRY TLNTDNTLVI 420
  421 KKLILDDAAM FQCLAINEAG ENSASTWLRV KTSAPIMELP PQNVTALDGK DATISCRAVG 480
  481 SPNPNITWIY NETQLVDISS RVQILESGDL LISNIRSVDA GLYICVRANE AGSVKGEAYL 540
  541 SVLVRTQIIQ PPVDTTVLLG LTATLQCKVS SDPSVPYNID WYREGQSSTP ISNSQRIGVQ 600
  601 ADGQLEIQAV RASDVGSYAC VVTSPGGNET RAARLSVIEL PFPPSNVKVE RLPEPQQRSI 660
  661 NVSWTPGFDG NSPISKFIIQ RREVSELEKF VGPVPDPLLN WITELSNVSA DQRWILLENL 720
  721 KAATVYQFRV SAVNRVGEGS PSEPSNVVEL PQEAPSGPPV GFVGSARSMS EIITQWQPPL 780
  781 EEHRNGQILG YILRYRLFGY NNVPWSYQNI TNEAQRNFLI QELITWKDYI VQIAAYNNMG 840
  841 VGVYTEGSKI KTKEGVPEAP PTNVKVEAIN STAARCRWTP PNPQQINGIN QGYKIQAWQR 900
  901 RLIDGEWRDI ERRMKTVPPS LIDPLAEQTA ILGGLEKFTE YNISVLCFTD PGDGVASSQV 960
  961 AVMTMDDVPD EVTGLHFDDV SDRSVKVLWA PPRASNGILT GYTVRYQVKD RPDTLKSFNL1020
 1021 TADDTELTVN QLQATTHYWF EIVAWTRVGS GIPKTATIQS GVEPVLPHAP TALALSNIEA1080
 1081 FSVVLQFTPG FDGNSSITKW KVEGQTARNM TWFTICEIND PDAETLTVTG LVPFTQYRLR1140
 1141 LSASNVVGSS KPSEATKDFQ TIQARPKHPP FNVTVRAMSA QQLRVRWIPL QQTEWYGNPR1200
 1201 GYNISYKQLV KTPGTIKYVP RSVVIEDHTA NSHVLDSLEE WTLYEVKMNA CNDVGCSKES1260
 1261 DTAVERTREA VPSYGPLDVQ ANATSSTTVV VQWGEVPRQH RNGQIDGYKV FYAAADRGQQ1320
 1321 VLHKTIPNNA TFTTTLTELK KYVVYHVQVL AYTRLGNGAL STPPIRVQTF EDTPGVPSNV1380
 1381 SFPDVSLTMA RIIWDVPVDP NGKILAYQVT YTLNGSAMLN YSREFPPSDR TFRATELLPG1440
 1441 KYYSFSCTAQ TRLGWGKIAT ALVYTTNNRE RPQAPSVPQI SRSQIQAHQI TFSWTPGRDG1500
 1501 FAPLRYYTVE MRENEGRWQP LPERVDPSLS SFTAVGLRPY MTYQFRIQAT NDLGPSAFSR1560
 1561 ESVIVRTLPA APAVGVGGLK VVPITTTSVR VQWSALETAL WNGDASTGGY RILYQQLSDF1620
 1621 PTALQSTPKT DVHGINENSV VLSDLQQDRN YEIVVLPFNS QGPGPATPPA AVYVGEAVPT1680
 1681 GEPRAVDAAP ISSTEVRLLW KPPKQSMQNG DILGYKIYYL VTYSPQALEP GRKWEEEIEV1740
 1741 VSATATSHSL VFLDKFTEYR IQLLAFNPAG DGPRSAPITV KTLPGVPSAP LHLRFSDITM1800
 1801 QSLEVTWDPP KFLNGEILGY LVTYETTEEN EKFSKQVKQK VSNTTLRVQN LEEEVTYTFT1860
 1861 VRAQTSVDYG PGISENVTTG PQDGSPVAPR DLILTKTLSS VEMHWINGPS GRGPILGYLI1920
 1921 EAKKREKGEP SFVYDSRWTK IEQTRKGMMQ DFTVSYHILM PSTAYTFRVI AYNRYGISFP1980
 1981 VYSKDSILTP SKLHLEYGYL QHKPFYRQTW FMVSLAATSI VIIVMVIAVL CVKSKSYKYK2040
 2041 QEAQKTLEES MAMSIDERQE LALELYRSRH GVGTGTLNSV GTLRSGTLGT LGRKSTSRPP2100
 2101 PGVHLGKSPP RPSPASVAYH SDEESLKCYD ENPDDSSVTE KPSEVSSSEA SQHSESENES2160
 2161 VRSDPHSFVN HYANVNDSLR QSWKKTKPVR NYSSYTDSEP EGSAVMSLNG GQIIVNNMAR2220
 2221 SRAPLPGFSS FV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..71] deduced N/A No confident structure predictions are available.
    2 View Details [72..162] PSI-BLAST 64.69897 Axonin-1
    3 View Details [163..645] PSI-BLAST 16.69897 No description for 2ocwA was found.
    4 View Details [646..749] PSI-BLAST 36.69897 No description for 2nziA was found.
    5 View Details [750..858] PSI-BLAST 12.522879 No description for 2edxA was found.
    6 View Details [859..1061] PSI-BLAST 22.522879 Integin beta-4 subunit
    7 View Details [1062..1160] FFAS03 4.9 Neural cell adhesion molecule 1, NCAM
    8 View Details [1161..1275] PSI-BLAST 35.30103 FRAGMENT OF HUMAN FIBRONECTIN ENCOMPASSING TYPE-III REPEATS 7 THROUGH 10
    9 View Details [1276..2000] PSI-BLAST 38.69897 No description for 2v5yA was found.
    10 View Details [2001..2105] deduced N/A No confident structure predictions are available.
    11 View Details [2106..2232] PSI-BLAST 3.39794 The solution structure of the second fibronectin type III domain of mouse Ephrin type-A receptor 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7
    Term Confidence Notes
  • transmembrane receptor activity
    		•  4.5103765150253 bayes_pls_golite062009
  • receptor activity
    		•  4.37793227341148 bayes_pls_golite062009
  • ankyrin binding
    		•  4.3701493214749 bayes_pls_golite062009
  • cytokine binding
    		•  3.96036354316187 bayes_pls_golite062009
  • growth factor binding
    		•  3.72927884588092 bayes_pls_golite062009
  • structural constituent of muscle
    		•  3.61132881971932 bayes_pls_golite062009
  • cytokine receptor activity
    		•  3.56710042152924 bayes_pls_golite062009
  • molecular transducer activity
    		•  3.48919490776358 bayes_pls_golite062009
  • signal transducer activity
    		•  3.48919490776358 bayes_pls_golite062009
  • protein binding
    		•  3.07386271831775 bayes_pls_golite062009
  • binding
    		•  3.01297199434173 bayes_pls_golite062009
  • cell adhesion molecule binding
    		•  2.10516556578644 bayes_pls_golite062009
  • interleukin-2 binding
    		•  1.94416903283263 bayes_pls_golite062009
  • telethonin binding
    		•  1.75786001683918 bayes_pls_golite062009
  • peptide hormone binding
    		•  1.75574680918945 bayes_pls_golite062009
  • prolactin receptor activity
    		•  1.70249663997305 bayes_pls_golite062009
  • ciliary neurotrophic factor receptor activity
    		•  1.67752723010524 bayes_pls_golite062009
  • axon guidance receptor activity
    		•  1.63462880446774 bayes_pls_golite062009
  • polysaccharide binding
    		•  1.56054192646753 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  1.49286223910051 bayes_pls_golite062009
  • protein kinase activity
    		•  1.43845497070856 bayes_pls_golite062009
  • myosin light chain kinase activity
    		•  1.31623717161573 bayes_pls_golite062009
  • growth hormone receptor activity
    		•  1.29794577237348 bayes_pls_golite062009
  • heparin binding
    		•  1.25921104554864 bayes_pls_golite062009
  • interleukin-6 receptor activity
    		•  1.19954764493429 bayes_pls_golite062009
  • interleukin-6 binding
    		•  1.19954764493429 bayes_pls_golite062009
  • receptor binding
    		•  1.17610053739662 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.17433712680111 bayes_pls_golite062009
  • actinin binding
    		•  1.15472194906555 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.14375759905113 bayes_pls_golite062009
  • kinase activity
    		•  1.1286195376114 bayes_pls_golite062009
  • interleukin-11 receptor activity
    		•  1.12006611526405 bayes_pls_golite062009
  • interleukin-11 binding
    		•  1.12006611526405 bayes_pls_golite062009
  • oncostatin-M receptor activity
    		•  0.857069434693096 bayes_pls_golite062009
  • leukemia inhibitory factor receptor activity
    		•  0.857069434693096 bayes_pls_golite062009
  • peptide binding
    		•  0.758731415132682 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  0.705756302293137 bayes_pls_golite062009
  • cell surface binding
    		•  0.702213571164749 bayes_pls_golite062009
  • protein dimerization activity
    		•  0.674567146312744 bayes_pls_golite062009
  • collagen binding
    		•  0.647753981851696 bayes_pls_golite062009
  • ciliary neurotrophic factor binding
    		•  0.645098074815475 bayes_pls_golite062009
  • interleukin-7 binding
    		•  0.578079107783197 bayes_pls_golite062009
  • transmembrane receptor protein tyrosine kinase activity
    		•  0.541677628277769 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.532471820485807 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.48635527300904 bayes_pls_golite062009
  • transcription activator activity
    		•  0.473002127561165 bayes_pls_golite062009
  • transferase activity
    		•  0.463609249016931 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
    		•  0.452957099078474 bayes_pls_golite062009
  • interleukin-2 receptor activity
    		•  0.437214918174507 bayes_pls_golite062009
  • identical protein binding
    		•  0.368517091723107 bayes_pls_golite062009
  • DNA binding
    		•  0.319941421296035 bayes_pls_golite062009
  • hormone binding
    		•  0.19211161691603 bayes_pls_golite062009
  • pattern binding
    		•  0.182490294011655 bayes_pls_golite062009
  • transcription factor binding
    		•  0.148740979131497 bayes_pls_golite062009
  • growth factor activity
    		•  0.0139937971827004 bayes_pls_golite062009
  • integrin binding
    		•  0.013361887492048 bayes_pls_golite062009
    8 No functions predicted.
    9 No functions predicted.
    10 No functions predicted.
    11
    Term Confidence Notes
  • transmembrane receptor activity
    		•  4.81256300373074 bayes_pls_golite062009
  • ankyrin binding
    		•  4.69755754047169 bayes_pls_golite062009
  • receptor activity
    		•  4.66147271961356 bayes_pls_golite062009
  • cytokine binding
    		•  4.43581512268554 bayes_pls_golite062009
  • cytokine receptor activity
    		•  4.08668869714207 bayes_pls_golite062009
  • growth factor binding
    		•  4.06808996928726 bayes_pls_golite062009
  • structural constituent of muscle
    		•  3.84784419485732 bayes_pls_golite062009
  • molecular transducer activity
    		•  3.69234048247377 bayes_pls_golite062009
  • signal transducer activity
    		•  3.69234048247377 bayes_pls_golite062009
  • protein binding
    		•  3.24522318184038 bayes_pls_golite062009
  • binding
    		•  3.12471204223368 bayes_pls_golite062009
  • interleukin-2 binding
    		•  2.38131482184802 bayes_pls_golite062009
  • cell adhesion molecule binding
    		•  2.32179186005318 bayes_pls_golite062009
  • prolactin receptor activity
    		•  2.15346920063421 bayes_pls_golite062009
  • ciliary neurotrophic factor receptor activity
    		•  2.15011619378442 bayes_pls_golite062009
  • peptide hormone binding
    		•  2.12033076929638 bayes_pls_golite062009
  • axon guidance receptor activity
    		•  2.01367445237355 bayes_pls_golite062009
  • telethonin binding
    		•  1.93341916149844 bayes_pls_golite062009
  • growth hormone receptor activity
    		•  1.71208292022464 bayes_pls_golite062009
  • polysaccharide binding
    		•  1.69642470905172 bayes_pls_golite062009
  • interleukin-6 receptor activity
    		•  1.66250899275539 bayes_pls_golite062009
  • interleukin-6 binding
    		•  1.66250899275539 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  1.6158868405814 bayes_pls_golite062009
  • interleukin-11 receptor activity
    		•  1.57103867592521 bayes_pls_golite062009
  • interleukin-11 binding
    		•  1.57103867592521 bayes_pls_golite062009
  • myosin light chain kinase activity
    		•  1.49217960276915 bayes_pls_golite062009
  • protein kinase activity
    		•  1.42856560840953 bayes_pls_golite062009
  • heparin binding
    		•  1.40418056272895 bayes_pls_golite062009
  • receptor binding
    		•  1.31676259534833 bayes_pls_golite062009
  • oncostatin-M receptor activity
    		•  1.27120658254426 bayes_pls_golite062009
  • leukemia inhibitory factor receptor activity
    		•  1.27120658254426 bayes_pls_golite062009
  • actinin binding
    		•  1.25223034107956 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.15899955607967 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.12142142875217 bayes_pls_golite062009
  • kinase activity
    		•  1.11027658115625 bayes_pls_golite062009
  • ciliary neurotrophic factor binding
    		•  1.02710126648804 bayes_pls_golite062009
  • interleukin-7 binding
    		•  0.992216255634359 bayes_pls_golite062009
  • peptide binding
    		•  0.92031154055894 bayes_pls_golite062009
  • protein dimerization activity
    		•  0.86564366658585 bayes_pls_golite062009
  • interleukin-2 receptor activity
    		•  0.817385502041609 bayes_pls_golite062009
  • cell surface binding
    		•  0.792329562040096 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  0.703490254739121 bayes_pls_golite062009
  • collagen binding
    		•  0.688581536921572 bayes_pls_golite062009
  • identical protein binding
    		•  0.564711394496051 bayes_pls_golite062009
  • transmembrane receptor protein tyrosine kinase activity
    		•  0.554350228628563 bayes_pls_golite062009
  • transcription activator activity
    		•  0.529736394173061 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.522840770355105 bayes_pls_golite062009
  • hormone binding
    		•  0.49524185948356 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.470959482317512 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
    		•  0.46168925186147 bayes_pls_golite062009
  • transferase activity
    		•  0.432850266451294 bayes_pls_golite062009
  • DNA binding
    		•  0.310798383307903 bayes_pls_golite062009
  • pattern binding
    		•  0.30071837231983 bayes_pls_golite062009
  • transcription factor binding
    		•  0.210682741845199 bayes_pls_golite062009
  • protein heterodimerization activity
    		•  0.1430595594485 bayes_pls_golite062009
  • protein homodimerization activity
    		•  0.116391819218123 bayes_pls_golite062009
  • integrin binding
    		•  0.0873424694168858 bayes_pls_golite062009
  • cytokine receptor binding
    		•  0.0682540643558203 bayes_pls_golite062009
  • growth factor activity
    		•  0.0477008672713168 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle