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Protein Overview: YQIG_ECOLI

General Information:
Name(s) found: YQIG_ECOLI [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
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  • Hypothetical outer membrane usher protein yqiG precursor - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 821 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGNIGANPV IIIGCASAYA VEFNKDLIEA EDRENVNLSQ FETDGQLPVG KYSLSTLINN  60
   61 KRTPIHLDLQ WVLIDNQTAV CVTPEQLTLL GFTDEFIEKT QQNLIDGCYP IEKEKQITTY 120
  121 LDKGKMQLSI SAPQAWLKYK DANWTPPELW NHGIAGAFLD YNLYASHYAP HQGDNSQNIS 180
  181 SYGQAGVNLG AWRLRTDYQY DQSFNNGKSQ ATNLDFPRIY LFRPIPAMNA KLTIGQYDTE 240
  241 SSIFDSFHFS GISLKSDENM LPPDLRGYAP QITGVAQTNA KVTVSQNNRI IYQENVPPGP 300
  301 FAITNLFNTL QGQLDVKVEE EDGRVTQWQV ASNSIPYLTR KGQIRYTTAM GKPTSVGGDS 360
  361 LQQPFFWTGE FSWGWLNNVS LYGGSVLTNR DYQSLAAGVG FNLNSLGSLS FDVTRSDAQL 420
  421 HNQDKETGYS YRANYSKRFE STGSQLTFAG YRFSDKNFVT MNEYINDTNH YTNYQNEKES 480
  481 YIVTFNQYLE SLRLNTYVSL ARNTYWDASS NVNYSLSLSR DFDIGPLKNV STSLTFSRIN 540
  541 WEEDNQDQLY LNISIPWGTS RTLSYGMQRN QDNEISHTAS WYDSSDRNNS WSVSASGDND 600
  601 EFKDMKASLR ASYQHNTENG RLYLSGTSQR DSYYSLNASW NGSFTATRHG AAFHDYSGSA 660
  661 DSRFMIDADG TEDIPLNNKR AVTNRYGIGV IPSVSSYITT SLSVDTRNLP ENVDIENSVI 720
  721 TTTLTEGAIG YAKLDTRKGY QIIGVIRLAD GSHPPLGISV KDETSHKELG LVADGGFVYL 780
  781 NGIQDDNKLA LRWGDKSCFI QPPNSSNLTT GTAILPCISQ N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..143] PSI-BLAST 28.522879 Crystal Structure of the Ternary Complex of FIMD (N-Terminal Domain) with FIMC and the Pilin Domain of FIMH
    2 View Details [144..258] deduced N/A No confident structure predictions are available.
    3 View Details [259..390] MSA 2.293979 View MSA. No confident structure predictions are available.
    4 View Details [391..544] MSA 1.298991 View MSA. No confident structure predictions are available.
    5 View Details [545..654] deduced N/A No confident structure predictions are available.
    6 View Details [655..821] MSA 3.295973 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • fimbrial usher porin activity
    		•  3.07403393180075 bayes_pls_golite062009
  • porin activity
    		•  1.02120594936422 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.63

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle