| Protein: | YQIG_ECOLI |
| Organism: | Escherichia coli |
| Length: | 821 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YQIG_ECOLI.
| Description | E-value | Query Range |
Subject Range |
|
|
846.0 | [0..5] | [818..25] |
|
|
836.0 | [0..6] | [821..26] |
|
|
814.0 | [0..5] | [814..16] |
|
|
814.0 | [0..5] | [814..16] |
|
|
811.0 | [0..5] | [814..16] |
|
|
811.0 | [0..5] | [814..31] |
|
|
809.0 | [0..5] | [814..31] |
|
|
809.0 | [0..5] | [814..31] |
|
|
809.0 | [0..5] | [814..16] |
|
|
809.0 | [0..5] | [814..31] |
|
Region A: Residues: [1-143] |
1 11 21 31 41 51
| | | | | |
1 MSGNIGANPV IIIGCASAYA VEFNKDLIEA EDRENVNLSQ FETDGQLPVG KYSLSTLINN 60
61 KRTPIHLDLQ WVLIDNQTAV CVTPEQLTLL GFTDEFIEKT QQNLIDGCYP IEKEKQITTY 120
121 LDKGKMQLSI SAPQAWLKYK DAN
|
| Detection Method: |  |
| Confidence: | 28.522879 |
| Match: | 1ze3D |
| Description: | Crystal Structure of the Ternary Complex of FIMD (N-Terminal Domain) with FIMC and the Pilin Domain of FIMH |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| fimbrial usher porin activity | 3.07403393180075 | bayes_pls_golite062009 |
| porin activity | 1.02120594936422 | bayes_pls_golite062009 |
|
Region A: Residues: [144-258] |
1 11 21 31 41 51
| | | | | |
1 WTPPELWNHG IAGAFLDYNL YASHYAPHQG DNSQNISSYG QAGVNLGAWR LRTDYQYDQS 60
61 FNNGKSQATN LDFPRIYLFR PIPAMNAKLT IGQYDTESSI FDSFHFSGIS LKSDE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [259-390] |
1 11 21 31 41 51
| | | | | |
1 NMLPPDLRGY APQITGVAQT NAKVTVSQNN RIIYQENVPP GPFAITNLFN TLQGQLDVKV 60
61 EEEDGRVTQW QVASNSIPYL TRKGQIRYTT AMGKPTSVGG DSLQQPFFWT GEFSWGWLNN 120
121 VSLYGGSVLT NR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [391-544] |
1 11 21 31 41 51
| | | | | |
1 DYQSLAAGVG FNLNSLGSLS FDVTRSDAQL HNQDKETGYS YRANYSKRFE STGSQLTFAG 60
61 YRFSDKNFVT MNEYINDTNH YTNYQNEKES YIVTFNQYLE SLRLNTYVSL ARNTYWDASS 120
121 NVNYSLSLSR DFDIGPLKNV STSLTFSRIN WEED
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [545-654] |
1 11 21 31 41 51
| | | | | |
1 NQDQLYLNIS IPWGTSRTLS YGMQRNQDNE ISHTASWYDS SDRNNSWSVS ASGDNDEFKD 60
61 MKASLRASYQ HNTENGRLYL SGTSQRDSYY SLNASWNGSF TATRHGAAFH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [655-821] |
1 11 21 31 41 51
| | | | | |
1 DYSGSADSRF MIDADGTEDI PLNNKRAVTN RYGIGVIPSV SSYITTSLSV DTRNLPENVD 60
61 IENSVITTTL TEGAIGYAKL DTRKGYQIIG VIRLADGSHP PLGISVKDET SHKELGLVAD 120
121 GGFVYLNGIQ DDNKLALRWG DKSCFIQPPN SSNLTTGTAI LPCISQN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
