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Protein Overview: AMID_ECOLI, YBJR...

General Information:
Name(s) found: YBJR_ECOLI [Swiss-Prot]
AMID_ECOLI [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • (P75820) Probable N-acetylmuramoyl-L-alanine amidase ybjR (EC 3.5.1.28) [Swiss-Prot]
  • N-acetylmuramoyl-L-alanine amidase amiD precursor (EC 3.5.1.28) - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 276 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRFFWLVAA ALLLAGCAGE KGIVEKEGYQ LDTRRQAQAA YPRIKVLVIH YTADDFDSSL  60
   61 ATLTDKQVSS HYLVPAVPPR YNGKPRIWQL VPEQELAWHA GISAWRGATR LNDTSIGIEL 120
  121 ENRGWQKSAG VKYFAPFEPA QIQALIPLAK DIIARYHIKP ENVVAHADIA PQRKDDPGPL 180
  181 FPWQQLAQQG IGAWPDAQRV NFYLAGRAPH TPVDTASLLE LLARYGYDVK PDMTPREQRR 240
  241 VIMAFQMHFR PTLYNGEADA ETQAIAEALL EKYGQD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..276] PSI-BLAST 65.522879 No description for 2bgxA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • N-acetylmuramoyl-L-alanine amidase activity
    		•  5.29207604418857 bayes_pls_golite062009
  • peptidoglycan binding
    		•  5.10635543502728 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  3.20235326428146 bayes_pls_golite062009
  • N-acetyl-anhydromuramoyl-L-alanine amidase activity
    		•  1.8723848738588 bayes_pls_golite062009
  • pattern binding
    		•  1.3169647365105 bayes_pls_golite062009
  • hydrolase activity
    		•  1.08510134637257 bayes_pls_golite062009
  • catalytic activity
    		•  0.628556091191359 bayes_pls_golite062009
  • receptor activity
    		•  0.165305685738616 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle