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Protein Overview: SBCC_ECOLI

General Information:
Name(s) found: SBCC_ECOLI [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Exonuclease sbcC - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 1048 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILSLRLKN LNSLKGEWKI DFTREPFASN GLFAITGPTG AGKTTLLDAI CLALYHETPR  60
   61 LSNVSQSQND LMTRDTAECL AEVEFEVKGE AYRAFWSQNR ARNQPDGNLQ VPRVELARCA 120
  121 DGKILADKVK DKLELTATLT GLDYGRFTRS MLLSQGQFAA FLNAKPKERA ELLEELTGTE 180
  181 IYGQISAMVF EQHKSARTEL EKLQAQASGV TLLTPEQVQS LTASLQVLTD EEKQLITAQQ 240
  241 QEQQSLNWLT RQDELQQEAS RRQQALQQAL AEEEKAQPQL AALSLAQPAR NLRPHWERIA 300
  301 EHSAALAHIR QQIEEVNTRL QSTMALRASI RHHAAKQSAE LQQQQQSLNT WLQEHDRFRQ 360
  361 WNNEPAGWRA QFSQQTSDRE HLRQWQQQLT HAEQKLNALA AITLTLTADE VATALAQHAE 420
  421 QRPLRQHLVA LHGQIVPQQK RLAQLQVAIQ NVTQEQTQRN AALNEMRQRY KEKTQQLADV 480
  481 KTICEQEARI KTLEAQRAQL QAGQPCPLCG STSHPAVEAY QALEPGVNQS RLLALENEVK 540
  541 KLGEEGATLR GQLDAITKQL QRDENEAQSL RQDEQALTQQ WQAVTASLNI TLQPLDDIQP 600
  601 WLDAQDEHER QLRLLSQRHE LQGQIAAHNQ QIIQYQQQIE QRQQLLLTTL TGYALTLPQE 660
  661 DEEESWLATR QQEAQSWQQR QNELTALQNR IQQLTPILET LPQSDELPHC EETVVLENWR 720
  721 QVHEQCLALH SQQQTLQQQD VLAAQSLQKA QAQFDTALQA SVFDDQQAFL AALMDEQTLT 780
  781 QLEQLKQNLE NQRRQAQTLV TQTAETLAQH QQHRPDDGLA LTVTVEQIQQ ELAQTHQKLR 840
  841 ENTTSQGEIR QQLKQDADNR QQQQTLMQQI AQMTQQVEDW GYLNSLIGSK EGDKFRKFAQ 900
  901 GLTLDNLVHL ANQQLTRLHG RYLLQRKASE ALEVEVVDTW QADAVRDTRT LSGGESFLVS 960
  961 LALALALSDL VSHKTRIDSL FLDEGFGTLD SETLDTALDA LDALNASGKT IGVISHVEAM1020
 1021 KERIPVQIKV KKINGLGYSK LESTFAVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..277] PSI-BLAST 16.69897 Sc Smc1hd:Scc1-C complex, ATPgS
    2 View Details [278..494] deduced N/A No confident structure predictions are available.
    3 View Details [495..838] FFAS03 2.11 Tropomyosin
    4 View Details [839..1048] PSI-BLAST 13.0 MJ0796

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle