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Protein Overview: NIRD_ECOLI

General Information:
Name(s) found: NIRD_ECOLI [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 108 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQWKDICKI DDILPETGVC ALLGDEQVAI FRPYHSDQVF AISNIDPFFE SSVLSRGLIA  60
   61 EHQGELWVAS PLKKQRFRLS DGLCMEDEQF SVKHYEARVK DGVVQLRG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] PSI-BLAST 22.522879 No description for 2jo6A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ubiquinol-cytochrome-c reductase activity
    		•  4.14993304522786 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor
    		•  4.14993304522786 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  3.9271223895757 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  3.76503174823869 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors
    		•  3.73915691834026 bayes_pls_golite062009
  • oxidoreductase activity, acting on other nitrogenous compounds as donors
    		•  3.30005888638622 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.96070332606483 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.63750663816019 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.33992572389215 bayes_pls_golite062009
  • electron carrier activity
    		•  2.2277730493777 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.79992184100284 bayes_pls_golite062009
  • catalytic activity
    		•  0.746741393172769 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  0.189086586993314 bayes_pls_golite062009
  • metal cluster binding
    		•  0.189086586993314 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle