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Protein Overview: NARH_ECOLI

General Information:
Name(s) found: NARH_ECOLI [Swiss-Prot]
Description(s) found:
Found 23 descriptions.
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  • Respiratory nitrate reductase 1 beta chain (EC 1.7.99.4) (Nitrate reductase A subunit beta) (Quinol-nitrate oxidoreductase subunit beta) - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 512 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIRSQVGMV LNLDKCIGCH TCSVTCKNVW TSREGVEYAW FNNVETKPGQ GFPTDWENQE  60
   61 KYKGGWIRKI NGKLQPRMGN RAMLLGKIFA NPHLPGIDDY YEPFDFDYQN LHTAPEGSKS 120
  121 QPIARPRSLI TGERMAKIEK GPNWEDDLGG EFDKLAKDKN FDNIQKAMYS QFENTFMMYL 180
  181 PRLCEHCLNP ACVATCPSGA IYKREEDGIV LIDQDKCRGW RMCITGCPYK KIYFNWKSGK 240
  241 SEKCIFCYPR IEAGQPTVCS ETCVGRIRYL GVLLYDADAI ERAASTENEK DLYQRQLDVF 300
  301 LDPNDPKVIE QAIKDGIPLS VIEAAQQSPV YKMAMEWKLA LPLHPEYRTL PMVWYVPPLS 360
  361 PIQSAADAGE LGSNGILPDV ESLRIPVQYL ANLLTAGDTK PVLRALKRML AMRHYKRAET 420
  421 VDGKVDTRAL EEVGLTEAQA QEMYRYLAIA NYEDRFVVPS SHRELAREAF PEKNGCGFTF 480
  481 GDGCHGSDTK FNLFNSRRID AIDVTSKTEP HP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..512] PSI-BLAST 162.0 Crystal structure of Nitrate Reductase A, NarGHI, from Escherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nitrate reductase activity
    		•  5.37863699545988 bayes_pls_golite062009
  • oxidoreductase activity, acting on other nitrogenous compounds as donors
    		•  4.93893088248019 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  4.88743394067551 bayes_pls_golite062009
  • formate dehydrogenase activity
    		•  4.7946737640663 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  4.55719216073898 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  4.48458992978765 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  3.86485405159262 bayes_pls_golite062009
  • electron carrier activity
    		•  3.21957528314564 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  2.62563452171293 bayes_pls_golite062009
  • 4 iron, 4 sulfur cluster binding
    		•  1.955968643763 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.70629793236166 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  1.30496569995148 bayes_pls_golite062009
  • metal cluster binding
    		•  1.30496569995148 bayes_pls_golite062009
  • binding
    		•  0.690970987880597 bayes_pls_golite062009
  • catalytic activity
    		•  0.488483980994331 bayes_pls_golite062009
  • protein binding
    		•  0.429260499627782 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  0.0827182678048914 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle