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Protein Overview: GUDX_ECOLI

General Information:
Name(s) found: GUDX_ECOLI [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Glucarate dehydratase-related protein (EC 4.2.1.-) (GDH-RP) (GlucDRP) - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 446 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATQSSPVIT DMKVIPVAGH DSMLLNIGGA HNAYFTRNIV VLTDNAGHTG IGEAPGGDVI  60
   61 YQTLVDAIPM VLGQEVARLN KVVQQVHKGN QAADFDTFGK GAWTFELRVN AVAALEAALL 120
  121 DLLGKALNVP VCELLGPGKQ REAITVLGYL FYIGDRTKTD LPYVENTPGN HEWYQLRHQK 180
  181 AMNSEAVVRL AEASQDRYGF KDFKLKGGVL PGEQEIDTVR ALKKRFPDAR ITVDPNGAWL 240
  241 LDEAISLCKG LNDVLTYAED PCGAEQGFSG REVMAEFRRA TGLPVATNMI ATNWREMGHA 300
  301 VMLNAVDIPL ADPHFWTLSG AVRVAQLCDD WGLTWGCHSN NHFDISLAMF THVGAAAPGN 360
  361 PTAIDTHWIW QEGDCRLTQN PLEIKNGKIA VPDAPGLGVE LDWEQVQKAH EAYKRLPGGA 420
  421 RNDAGPMQYL IPGWTFDRKR PVFGRH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..446] PSI-BLAST 94.0 D-glucarate dehydratase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphopyruvate hydratase activity
    		•  2.09734347546664 bayes_pls_golite062009
  • lyase activity
    		•  0.953241510600178 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.908937887773213 bayes_pls_golite062009
  • hydro-lyase activity
    		•  0.874016693867333 bayes_pls_golite062009
  • glucarate dehydratase activity
    		•  0.760146153620695 bayes_pls_golite062009
  • catalytic activity
    		•  0.534516847146079 bayes_pls_golite062009
  • racemase and epimerase activity, acting on hydroxy acids and derivatives
    		•  0.207225670131667 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle