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Protein Overview: GLCF_ECOLI

General Information:
Name(s) found: GLCF_ECOLI [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • Glycolate oxidase iron-sulfur subunit - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 407 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTQLTEEMR QNARALEADS ILRACVHCGF CTATCPTYQL LGDELDGPRG RIYLIKQVLE  60
   61 GNEVTLKTQE HLDRCLTCRN CETTCPSGVR YHNLLDIGRD IVEQKVKRPL PERILREGLR 120
  121 QVVPRPAVFR ALTQVGLVLR PFLPEQVRAK LPAETVKAKP RPPLRHKRRV LMLEGCAQPT 180
  181 LSPNTNAATA RVLDRLGISV MPANEAGCCG AVDYHLNAQE KGLARARNNI DAWWPAIEAG 240
  241 AEAILQTASG CGAFVKEYGQ MLKNDALYAD KARQVSELAV DLVELLREEP LEKLAIRGDK 300
  301 KLAFHCPCTL QHAQKLNGEV EKVLLRLGFT LTDVPDSHLC CGSAGTYALT HPDLARQLRD 360
  361 NKMNALESGK PEMIVTANIG CQTHLASAGR TSVRHWIEIV EQALEKE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..299] PSI-BLAST 16.30103 Pyruvate-ferredoxin oxidoreductase, PFOR, domain I; Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI; Pyruvate-ferredoxin oxidoreductase, PFOR, domain II; Pyruvate-ferredoxin oxidoreductase, PFOR, domain III; Pyruvate-ferredoxin oxidoreductase, PFOR, domain V
    2 View Details [300..407] Pfam 16.119186 No description for PF02754.7 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • formate dehydrogenase activity
    		•  4.7946737640663 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  3.13953145151561 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  2.76338281383262 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  2.71230504811675 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  2.70037803782769 bayes_pls_golite062009
  • electron carrier activity
    		•  2.45164586846912 bayes_pls_golite062009
  • transketolase activity
    		•  2.14943266725938 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  2.09041948600744 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  1.80621486978907 bayes_pls_golite062009
  • 4 iron, 4 sulfur cluster binding
    		•  1.5619384041388 bayes_pls_golite062009
  • pyruvate dehydrogenase activity
    		•  1.51399046206095 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
    		•  1.50909082807368 bayes_pls_golite062009
  • metal cluster binding
    		•  1.48723437664337 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  1.48723437664337 bayes_pls_golite062009
  • pyruvate dehydrogenase (acetyl-transferring) activity
    		•  1.33926757092229 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.660370448422897 bayes_pls_golite062009
  • catalytic activity
    		•  0.488483980994331 bayes_pls_golite062009
  • acetolactate synthase activity
    		•  0.10785955428579 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  0.0827182678048914 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle