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Protein Overview: GADE_ECOLI

General Information:
Name(s) found: GADE_ECOLI [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Transcriptional regulator gadE - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 175 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFLMTKDSF LLQGFWQLKD NHEMIKINSL SEIKKVGNKP FKVIIDTYHN HILDEEAIKF  60
   61 LEKLDAERII VLAPYHISKL KAKAPIYFVS RKESIKNLLE ITYGKHLPHK NSQLCFSHNQ 120
  121 FKIMQLILKN KNESNITSTL NISQQTLKIQ KFNIMYKLKL RRMSDIVTLG ITSYF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..175] PSI-BLAST 23.045757 Crystallographic structure of response regulator StyR from Pseudomonas fluorescens

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  4.43807682690914 bayes_pls_golite062009
  • signal transducer activity
    		•  3.66828284948575 bayes_pls_golite062009
  • molecular transducer activity
    		•  3.66828284948575 bayes_pls_golite062009
  • two-component response regulator activity
    		•  3.21130891290069 bayes_pls_golite062009
  • DNA binding
    		•  2.11437569924724 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.99914662234685 bayes_pls_golite062009
  • transcription factor activity
    		•  1.5797706988574 bayes_pls_golite062009
  • binding
    		•  1.22427537074115 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle