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Protein Overview: orf19.3093, orf1...

General Information:
Name(s) found: orf19.3093 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.10605 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
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  • MSH2 CGDID:CAL0001526 Assembly 19, Contig19-10166 (25058, 27679) CDS, translated using codon table 12 (873 residues)||Protein described as DNA mismatch repair factor; transcription is regulated by Nrg1p; flucytosine repressed; RNA abundance regulated by t [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • MSH2 CGDID:CAL0001526 Assembly 19, Contig19-20166 (25032, 27653) CDS, translated using codon table 12 (873 residues)||Protein described as DNA mismatch repair factor; transcription is regulated by Nrg1p; flucytosine repressed; RNA abundance regulated by t [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 873 amino acids

    Gene Ontology:
    Cellular Component: MutSalpha complex [IEA]
    nuclear chromosome [IEA]
    MutSbeta complex [IEA]
    Biological Process: removal of nonhomologous ends [IEA]
    meiotic gene conversion [IEA]
    meiotic mismatch repair [IEA]
    chromatin silencing at silent mating-type cassette [IEA]
    Molecular Function: ATPase activity [IEA]
    ATP binding [IEA]
    double-strand/single-strand DNA junction binding [IEA]
    loop DNA binding [IEA]
    Y-form DNA binding [IEA]
    four-way junction DNA binding [IEA]
    guanine/thymine mispair binding [IEA]
    single base insertion or deletion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTKIDLKF SDLADERSYF KKYSQLPPKE STTIRFIDHN NHDYFTALGS DADLIAEKIY  60
   61 RTQSVIKHHN QTKYVTISPQ NFKESLNYCL QNHFKVEVYH SKTFQLISSG TAGNLDSLSE 120
  121 EFDIDFDFRD GSSSSIAAIK LGNKVGVCVI ADSIVHLSEF EDNELYSNLE SLLIQLGVKE 180
  181 VVIPANVDNK KFFQMLEKLN DLVVSAAKSF PKDNEQDISK LLDTENLELS LAAKGINSLD 240
  241 YALALSCCGA LIDYLDLLNG DKTFEINKYN LSTFMKLDSS TMKALNILPN GTQKAITSIF 300
  301 ELFKCKTLGG SRLLSQWLKQ PLIDLSLIEE RQELVKAMID DTSLRVEIQE FLSKVPDINR 360
  361 LLKKIGLGVK RSGAENKKLN EVVNLYQLVS LLPNLTEILT IDYYAKPLKK DEQALSKFCE 420
  421 LVETTIDLDT SFDKDYKIKP DFDPSLSEIS NNMESAFKAI NDLYLEAGDD LNLDTASNKL 480
  481 KLEQHQTHGW CMRVTRNDSR VLRGKSQYKE LQTVKSGVFF TTIEMKRLSQ EYTKAYDEYN 540
  541 VKQSEVIKEI LSLTLTYEPV LQSLSSTLAH LDVITCFATT AMLNSYTQPK LFPFESSRKI 600
  601 NLIESRHPLL EVQDDINFIS NDVKMDDKHF AIITGPNMGG KSTYIRQIGT IALMAQVGSF 660
  661 IPANDGAELP IFDAILSRVG AGDSQLKGLS TFMIEMLETS SILATATANS LIIIDELGRG 720
  721 TSTYDGFGLA WAISEELIKR KCFAVFATHF HELSQLSEKY DGVENLNLMA EQTNEDITLI 780
  781 YKVGPGISNT SFGISVAEKL HMPEKIVNMA KRKVEELSEE PPIKKQCSET EVREGMSRLR 840
  841 EILKEWRNNP EINIADSLAK EPNKFINYIV DTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle