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Protein Overview: tbx-8

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..237] PSI-BLAST 73.0 T-box protein 3, tbx3
2 View Details [238..315] MSA 2.171995 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • transcription regulator activity
  • 5.42929256050781 bayes_pls_golite062009
  • DNA binding
  • 5.31133900263778 bayes_pls_golite062009
  • nucleic acid binding
  • 5.16722510757739 bayes_pls_golite062009
  • transcription factor activity
  • 4.50526425463039 bayes_pls_golite062009
  • binding
  • 3.82913410895101 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 2.81812565096059 bayes_pls_golite062009
  • protein binding
  • 2.61625563263605 bayes_pls_golite062009
  • transcription activator activity
  • 2.56828839945617 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 2.23604897773023 bayes_pls_golite062009
  • DNA strand annealing activity
  • 1.36275472058409 bayes_pls_golite062009
  • transcription repressor activity
  • 1.27337392672914 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.6498675574078 bayes_pls_golite062009
  • chromatin binding
  • 0.63177553202971 bayes_pls_golite062009
  • transcription factor binding
  • 0.628837188707778 bayes_pls_golite062009
  • double-stranded DNA binding
  • 0.62643527396553 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.0996675597396202 bayes_pls_golite062009
  • protein dimerization activity
  • 0.0889583851427092 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle