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Protein Overview: YIP4

General Information:
Name(s) found: YIP4 / YGL198W [SGD]
Description(s) found:
Found 18 descriptions.
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  • Protein that interacts with Rab GTPases, localized to late Golgi vesicles; computational analysis of large-scale protein-protein interaction data suggests a possible role in vesicle-mediated transport [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 235 amino acids

    Gene Ontology:
    Cellular Component: Golgi apparatus [IDALink to PubMed article]
    Biological Process: vesicle-mediated transport [RCALink to PubMed article]
    Molecular Function: Rab GTPase binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYGREDTTI EPDFIEPDAP LAASGGVADN IGGTMQNSGS RGTLDETVLQ TLKRDVVEIN  60
   61 SRLKQVVYPH FPSFFSPSDD GIGAADNDIS ANCDLWAPLA FIILYSLFVS HARSLFSSLF 120
  121 VSSWFILLVM ALHLRLTKPH QRVSLISYIS ISGYCLFPQV LNALVSQILL PLAYHIGKQN 180
  181 RWIVRVLSLV KLVVMALCLM WSVAAVSWVT KSKTIIEIYP LALCLFGMAW LSTIL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..235] Pfam 38.657577 No description for PF04893.8 was found. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle