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Protein Overview: SEBP3_ARATH

General Information:
Name(s) found: SEBP3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9293953|dbj|BAB01856.1| selenium-binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28827582|gb|AAO50635.1| putative selenium binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|26450316|dbj|BAC42274.1| putative selenium binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15229520|ref|NP_189022.1| SBP3 (selenium-binding protein 3); selenium binding [Arabidopsis thaliana] [NCBI NR]
  • Selenium-binding protein 3 OS=Arabidopsis thaliana GN=SBP3 PE=2 SV=1 [Swiss-Prot]
  • (Q9LK38) Selenium-binding protein [athaliana3702.FASTAC.txt]
  • selenium-binding protein [Arabidopsis thaliana]gi|26450316|dbj|BAC42274.1| putative selenium binding protein [Arabidopsis thaliana]gi|28827582|gb|AAO50635.1| putative selenium binding protein [Arabidopsis thaliana]gi|15229520|ref|NP_189022.1| selenium- [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Selenium-binding family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SBP3 | selenium-binding family protein | chr3:8581708-8583711 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative selenium binding protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • selenium-binding protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • selenium binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SBP3 | selenium-binding protein 3 | chr3:8581701-8583704 FORWARD LENGTH=480 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 480 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: NONE FOUND
    Molecular Function: selenium binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAAMNNHDG DCCKSGPGYA TPLLAMSGPR EKLIYVAAIY TGTGQAKPDY LATVDVEPSS  60
   61 STYSSVIHRL PMPYLEDELH HSGWNSCSSC YGDSSCERRY LILPSLLSGR IYVIDTKTNP 120
  121 REPSLHKFVD PAEVLEKTGL AYPHQPHCLA SGDVLVSCLG DEDGNAEGSG FLLLDSEFNI 180
  181 KGRWEKDGNS PLYGYDFWYQ PRHKTMISTS WGAPAAFTKG FDLKDVSDGL YGKHLHVYSW 240
  241 PQGELKQILD LGDTGLLPLE VRFLHEPDKA TGFAGCALSS TLVRFFKNDD ETWSHEVAIS 300
  301 VEPLKVENWI LPEMPGLITD FLISLDDRFL YCSNWLHGDI RQYNIEDPKT PVLTGQIHVG 360
  361 GLVQKGSLVL ALGEEGKAFQ FDVPKIKGQR LRGGPQMFQL SLDGKRLYVT NSLFSVWDRQ 420
  421 FYPELVEKGS HMLQIDVDTD KGGLSINPNF FVDFGTEPDG PSLAHEMRYP GGDCTSDIWV 480
  481

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..186] MSA 3.246927 View MSA. No confident structure predictions are available.
    2 View Details [187..480] PSI-BLAST 26.045757 Surface layer protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.565955069185473 bayes_pls_golite062009
  • protein binding
    		•  0.188092612225384 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle