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Protein Overview: gi|15222420, gi|...

General Information:
Name(s) found: gi|15222420 [NCBI NR]
gi|12597838 [NCBI NR]
Description(s) found:
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  • gi|15222420|ref|NP_174450.1| copper amine oxidase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|12597838|gb|AAG60148.1|AC074360_13 copper amine oxidase, putative [Arabidopsis thaliana] [NCBI NR]
  • (Q9C6V9) Copper amine oxidase, putative [athaliana3702.FASTAC.txt]
  • copper amine oxidase, putative [Arabidopsis thaliana]gi|15222420|ref|NP_174450.1| copper amine oxidase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Copper amine oxidase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • copper ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • copper amine oxidase, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 420 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: amine metabolic process [IEA]
    Molecular Function: copper ion binding [IEA][ISS]
    quinone binding [IEA]
    amine oxidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNRWANWEF HMSFDVRAGL VISLASIFDM DMNRYRQVLY KGHLSEMFVP YMDPNDDWYF  60
   61 ISYLDCGEFG CGQTAVSLEP YTDCPPNAAF MDGIFPGQDG TPTKISNVMC IFEKYAGDIM 120
  121 WRHTEAEVPG LKITEVRPDV SLVARMVTTV GNYDYIIEYE FKPSGSIKMG VGLTGVLEVK 180
  181 PVEYVHTSEI KEDDIYGTIV ADNTVGVNHD HFVTFRLDLD IDGTENSFVR TELVTKRTPK 240
  241 SVNTPRKSYW TTKRNTAKTE ADARVKLGLR AEELVVVNPT KKTKHGNEVG YRLLPGPASS 300
  301 PLLVQDDYPQ IRAAFTNYNV WITPYNKSEV WASGLYADRS QGDDTLAVWS QRDREIENKD 360
  361 IVMWYTVGFH HVPCQEDFPT MPTMFGGFEL RPTNFFEQNP VLKAKPFNLT TIPKCTTKNE 420
  421

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..420] PSI-BLAST 141.0 PSAO and Xenon

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.142231613649539 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle