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View Structure Prediction Details

Protein: gi|15222420, gi|...
Organism: Arabidopsis thaliana
Length: 420 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15222420, gi|....

Description E-value Query
Range
Subject
Range
gi|28921972, gi|... - gi|32409785|ref|XP_325373.1| hypothetical protein [Neurospora crassa], gi|28921972|gb|EAA31244.1| pe...
gi|85097614 - gi|85097614|ref|XP_960480.1| peroxisomal copper amine oxidase [Neurospora crassa OR74A]
558.0 [0..3] [420..244]

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Predicted Domain #1
Region A:
Residues: [1-420]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNRWANWEF HMSFDVRAGL VISLASIFDM DMNRYRQVLY KGHLSEMFVP YMDPNDDWYF  60
   61 ISYLDCGEFG CGQTAVSLEP YTDCPPNAAF MDGIFPGQDG TPTKISNVMC IFEKYAGDIM 120
  121 WRHTEAEVPG LKITEVRPDV SLVARMVTTV GNYDYIIEYE FKPSGSIKMG VGLTGVLEVK 180
  181 PVEYVHTSEI KEDDIYGTIV ADNTVGVNHD HFVTFRLDLD IDGTENSFVR TELVTKRTPK 240
  241 SVNTPRKSYW TTKRNTAKTE ADARVKLGLR AEELVVVNPT KKTKHGNEVG YRLLPGPASS 300
  301 PLLVQDDYPQ IRAAFTNYNV WITPYNKSEV WASGLYADRS QGDDTLAVWS QRDREIENKD 360
  361 IVMWYTVGFH HVPCQEDFPT MPTMFGGFEL RPTNFFEQNP VLKAKPFNLT TIPKCTTKNE 420
  421 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 141.0
Match: 1w2zA
Description: PSAO and Xenon
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142231613649539 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle