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Protein Overview: gi|15230660, gi|...

General Information:
Name(s) found: gi|15795134 [NCBI NR]
gi|15230660 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|15795134|dbj|BAB02512.1| transposase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15230660|ref|NP_187908.1| hAT dimerisation domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 605 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: protein dimerization activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGTVVDVRE HGICVDKKKS RVKCNYCGKE MNSFHRLKHH LGAVGTDVTH CDQVSLTLRE  60
   61 TFRTMLMEDK SGYTTPKTKR VGKFQMADSR KRRKTEDSSS KSVSPEQGNV AVEVDNQDLL 120
  121 SSKAQKCIGR FFYEHCVDLS AVDSPCFKEM MMALGVGQKI PDSHDLNGRL LQEAMKEVQD 180
  181 YVKNIKDSWK ITGCSILLDA WIDPKGHDLV SFVADCPAGP VYLKSIDVSV VKNDVTALLS 240
  241 LVNGLVEEVG VHNVTQIIAC STSGWVGELG KLFSGHDREV FWSVSLSHCF ELMLVKIGKM 300
  301 RSFGDILDKV NTIWEFINNN PSALKIYRDQ SHGKDITVSS SEFEFVKPYL ILKSVFKAKK 360
  361 NLAAMFASSV WKKEEGKSVS NLVNDSSFWE AVEEILKCTS PLTDGLRLFS NADNNQHVGY 420
  421 IYDTLDGIKL SIKKEFNDEK KHYLTLWDVI DDVWNKHLHN PLHAAGYYLN PTSFYSTDFH 480
  481 LDPEVSSGLT HSLVHVAKEG QIKIASQLDR YRLGKDCFNE ASQPDQISGI SPIDWWTEKA 540
  541 SQHPELQSFA IKILSQTCEG ASRYKLKRSL AEKLLLTEGM SHCERKHLEE LAFVHYNLHL 600
  601 QSCKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] FFAS03 1.01 Solution Structure of a Human C2H2-type Zinc Finger Protein
    2 View Details [110..605] PSI-BLAST 43.522879 Three-dimensional structure of the Hermes DNA transposase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.304205134456748 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.722279828632226 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29272620969648 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.24934115119652 bayes_pls_golite062009
  • nuclease activity
    		•  0.239989310123501 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle