YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|15227520, gi|...

General Information:
Name(s) found: gi|3461827 [NCBI NR]
gi|25370556 [NCBI NR]
gi|15227520 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|3461827|gb|AAC32921.1| disease resistance protein (TIR class), putative [Arabidopsis thaliana] [NCBI NR]
  • pir||E84443 probable disease resistance protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15227520|ref|NP_178403.1| Toll-Interleukin-Resistance (TIR) domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • (O80617) Putative disease resistance protein [athaliana3702.FASTAC.txt]
  • disease resistance protein (TIR class), putative [Arabidopsis thaliana]gi|25370556|pir||E84443 probable disease resistance protein [imported] - Arabidopsis thalianagi|15227520|ref|NP_178403.1| Toll-Interleukin-Resistance (TIR) domain-containing protein [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Toll-Interleukin-Resistance (TIR) domain-containing protein, domain signature TIR exists, suggestive of a disease resistance protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | Toll-Interleukin-Resistance (TIR) domain-containing protein | chr2:889763-890519 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • transmembrane receptor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • disease resistance protein (TIR class), putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Toll-Interleukin-Resistance (TIR) domain family protein | chr2:889764-890520 FORWARD LENGTH=204 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Disease resistance protein (TIR class), putative OS=Arabidopsis thaliana GN=At2g03030 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 204 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    defense response [ISS]
    Molecular Function: transmembrane receptor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFFSPTQVF LNYRGEQLRR SFVSHLIDAF ERNEINFFVD KYEQRGKDLK NLFLRIQESK  60
   61 IALAIFSTRY TESSWCLDEL VKIKKLADKK KLHVIPIFYK VKVEDVRKQT GEFGDNFWTL 120
  121 AKVSSGDQIK KWKEALECIP NKMGLSLGDK SSEADFIKEV VKAVQCVVAT IGLEEEEENH 180
  181 FGKKKRKDCK CELPDLKKSR TKKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..100] PSI-BLAST 3.221849 No description for 2j67A was found.
    2 View Details [101..149] MSA 4.282996 View MSA. No confident structure predictions are available.
    3 View Details [150..204] MSA 18.175997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle