General Information: |
|
Name(s) found: |
gi|20197280
[NCBI NR]
gi|18398260 [NCBI NR] gi|133778824 [NCBI NR] |
Description(s) found:
Found 12 descriptions. SHOW ALL |
|
Organism: | Arabidopsis thaliana |
Length: | 561 amino acids |
Gene Ontology: |
|
Cellular Component: |
nucleus
[IEA]
|
Biological Process: |
mRNA processing
[IEA]
|
Molecular Function: |
nucleic acid binding
[IEA][ISS]
nucleotide binding [IEA] RNA binding [IEA] |
Sequence: |
|
Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MDFDEYEYLE KTVENPHLEN EVGNGGGDEK VKSEGKERSR SSRHRGDKKK ERDEDEDGRR 60 61 SKRSRSHHRS RSRDRERDRH RSSREHRDRD REKDVDKEER NGKDRERDRD KDRDSKGRDH 120 121 EKDRSRRSRS RSERHRSQER EKSLEIEPKE RETKDRDRDR RRHKDKKEDK VEPEADPERD 180 181 QRTVFAYQIA LRATERDVYE FFSRAGKVRD VRIIMDRISR RSRGIGYVEF YDTMSVPMAI 240 241 ALSGQPLLGQ PVMVKPSEAE KNLVQSTTAA AGAGGMLGPY SGGARRLYVG NLHINMSEDD 300 301 LRKVFESFGS VELVQVPRDE TGLCKGFGFV QFARLEDARN ALNLNGQLEI AGRAIKVSAV 360 361 TDQTEVPEAG QTQTTGDLDD DDGGGLSLNA QSRALLMQKL DRSGTASSTG LTTAASFNGG 420 421 VSTISSLAAP ALVQGSFPAV AGLAGSGIIP GVIPAGFDPI GVPSECLLLK NMFDPSTETE 480 481 DDFDEDIKED VKEECSKFGK LNHIFVDKNS VGFVYLRFEN AQAAIGAQRA LHGRWFAGKM 540 541 ITATYMTTEA YEAKFPESKV V |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..79] | 3.173996 | View MSA. No confident structure predictions are available. | |
2 | View Details | [80..174] | N/A | No confident structure predictions are available. | |
3 | View Details | [175..375] | 37.69897 | Poly(A)-binding protein | |
4 | View Details | [376..464] | N/A | No confident structure predictions are available. | |
5 | View Details | [465..561] | 7.30103 | Splicing factor U2AF 65 KDa subunit |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.62 |
Source: Reynolds et al. (2008)