YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: AB5F_ARATH

General Information:
Name(s) found: AB5F_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • ABC transporter F family member 5 OS=Arabidopsis thaliana GN=ABCF5 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 692 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to nematode [IEP]
    Molecular Function: transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSTNLHSL DLRSTFFTGL RTSPIPSNFI KISSISNPRR DISTIRAQVS TISLETSVKQ  60
   61 RQDEIESLFS KQPSQQDSDR KRNGKSSKNG ASGISSGVKL ENIRKSYKGV TVLKDVTWEV 120
  121 KRGEKVGLVG VNGAGKTTQL RIITGQEEPD SGNVIKAKPN MKVAFLSQEF EVSMSKTVRE 180
  181 EFMTAFKEEM EITEKLEKVQ KAIEGSVDDL DLMGRLLDEF DLLQRRAQAV NLDSVDAKIS 240
  241 KLMPELGFAP EDADRLVASF SGGWQMRMSL GKILLQDPDL LLLDEPTNHL DLDTIEWLEG 300
  301 YLQKQDVPMV IISHDRAFLD QLCTKIVETE MGVSRTFEGN YSQYVISKAE WIETQNAAWE 360
  361 KQQKDIDSTK DLIARLGAGA NSGRASTAEK KLEKLQEQEL IEKPFQRKQM KIRFPERGTS 420
  421 GRSVVNVKNI DFGFEDKMLF KKANLSIERG EKIAILGPNG CGKSTLLKLI MGLEKPVKGE 480
  481 VILGEHNVLP NYFEQNQAEV LDLDKTVLET VCEAAEDWRS DDIKGLLGRC NFKADMLDRK 540
  541 VSLLSGGEKA RLAFCKFMVT PSTLLVLDEP TNHLDIPSKE MLEEAINEYQ GTVIAVSHDR 600
  601 YFIKQIVNRV IEVEDGCLED YAGDYNYYLE KNLDARTKEL EREAELEEKA PKVKAKSKMS 660
  661 KAEKEARKKQ KMQAFQQAKQ KSKASKNSKR WN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] PSI-BLAST 44.69897 No description for 2hydA was found.
    2 View Details [106..692] PSI-BLAST 55.30103 RNase-L Inhibitor


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle