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View Structure Prediction Details

Protein: AB5F_ARATH
Organism: Arabidopsis thaliana
Length: 692 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AB5F_ARATH.

Description E-value Query
Range
Subject
Range
gi|15912315, gi|... - gi|23308219|gb|AAN18079.1| At5g64840/MXK3_6 [Arabidopsis thaliana], gi|15912315|gb|AAL08291.1| AT5g6...
516.0 [0..1] [692..1]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSTNLHSL DLRSTFFTGL RTSPIPSNFI KISSISNPRR DISTIRAQVS TISLETSVKQ  60
   61 RQDEIESLFS KQPSQQDSDR KRNGKSSKNG ASGISSGVKL ENIRK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.69897
Match: 2hydA
Description: No description for 2hydA was found.

Predicted Domain #2
Region A:
Residues: [106-692]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYKGVTVLKD VTWEVKRGEK VGLVGVNGAG KTTQLRIITG QEEPDSGNVI KAKPNMKVAF  60
   61 LSQEFEVSMS KTVREEFMTA FKEEMEITEK LEKVQKAIEG SVDDLDLMGR LLDEFDLLQR 120
  121 RAQAVNLDSV DAKISKLMPE LGFAPEDADR LVASFSGGWQ MRMSLGKILL QDPDLLLLDE 180
  181 PTNHLDLDTI EWLEGYLQKQ DVPMVIISHD RAFLDQLCTK IVETEMGVSR TFEGNYSQYV 240
  241 ISKAEWIETQ NAAWEKQQKD IDSTKDLIAR LGAGANSGRA STAEKKLEKL QEQELIEKPF 300
  301 QRKQMKIRFP ERGTSGRSVV NVKNIDFGFE DKMLFKKANL SIERGEKIAI LGPNGCGKST 360
  361 LLKLIMGLEK PVKGEVILGE HNVLPNYFEQ NQAEVLDLDK TVLETVCEAA EDWRSDDIKG 420
  421 LLGRCNFKAD MLDRKVSLLS GGEKARLAFC KFMVTPSTLL VLDEPTNHLD IPSKEMLEEA 480
  481 INEYQGTVIA VSHDRYFIKQ IVNRVIEVED GCLEDYAGDY NYYLEKNLDA RTKELEREAE 540
  541 LEEKAPKVKA KSKMSKAEKE ARKKQKMQAF QQAKQKSKAS KNSKRWN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.30103
Match: 1yqtA
Description: RNase-L Inhibitor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle