YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|9294015, gi|1...

General Information:
Name(s) found: gi|9294015 [NCBI NR]
gi|15231330 [NCBI NR]
Description(s) found:
Found 10 descriptions.
SHOW ALL
  • gi|9294015|dbj|BAB01918.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|15231330|ref|NP_187982.1| protein kinase family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 753 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein amino acid phosphorylation [IEA]
    Molecular Function: ATP binding [IEA]
    protein tyrosine kinase activity [IEA]
    protein kinase activity [IEA]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRLQKRGKQ EKPVVSDGAQ KVIVAVKASR EIPKTALIWA LTHVVQPGDC ITLIVVVPSH  60
   61 NSGRKLWGFT KSFPMFAGDC ASGHRKSHSE ALPEIKSDLT DTCSQMILQL HDVYDPNKIN 120
  121 VKIKIVSGSP CGAVAAESKK AQANWVVMDK HLKQEEKRCM DELQCNIVVM KRSQAKVLRL 180
  181 NLVGSPKKDA GKECPLPSGP EAASEKHSKN TKGLLDADRG LPVTPTSSPE LGTPFTSTEA 240
  241 GTSSVSSSDL GTSPFFTLGM NGYMKKDGAL VIKENDGLDD SGSETESENQ SLASTSMRFQ 300
  301 PWISEYIGTH RHSSQEAEES LLWKNDDRAQ ISTTKALLEK FSKLDVEVGL SSSRRMDLEF 360
  361 SGNVRDAISL SRSAPPGPPP LCSICQHKAP VFGKPPRLFT YAELELATGG FSQANFLAEG 420
  421 GYGSVHRGVL PEGQVVAVKQ HKLASSQGDV EFCSEVEVLS CAQHRNVVML IGFCIEDSRR 480
  481 LLVYEYICNG SLDSHLYGRQ KETLEWPARQ KIAVGAARGL RYLHEECRVG CIVHRDMRPN 540
  541 NILITHDNEP LVGDFGLARW QPDGEMGVDT RVIGTFGYLA PEYAQSGQIT EKADVYSFGV 600
  601 VLVELVTGRK AIDITRPKGQ QCLTEWARPL LEEYAIDELI DPRLGNRFVE SEVICMLHAA 660
  661 SLCIRRDPHL RPRMSQVLRI LEGDMIMDGN YASTPGSEAG NRSGRFWADH YSGQLTNDGS 720
  721 DRFSERLSVE TPRLALRERE RSQRFELNHN KQY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..351] PSI-BLAST 32.69897 Crystal Structure of the 3 Ig form of FGFR3c in complex with FGF1
    2 View Details [352..753] PSI-BLAST 71.0 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  3.17641566810715 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.65769780435188 bayes_pls_golite062009
  • signal transducer activity
    		•  2.65769780435188 bayes_pls_golite062009
  • receptor activity
    		•  2.6096213829037 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  2.30901753427485 bayes_pls_golite062009
  • protein kinase activity
    		•  1.36635494500222 bayes_pls_golite062009
  • protein binding
    		•  1.17809977833322 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.02286631988334 bayes_pls_golite062009
  • kinase activity
    		•  0.929878054374821 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.878595022643164 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  0.564762108830441 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.518011841154552 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  0.318890055375093 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.316848380982695 bayes_pls_golite062009
  • DNA binding
    		•  0.304320681250924 bayes_pls_golite062009
  • receptor binding
    		•  0.125304929251743 bayes_pls_golite062009
  • transferase activity
    		•  0.053007146193305 bayes_pls_golite062009
  • protein complex binding
    		•  0.0274917166273303 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle