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Protein Overview: gi|15230659, gi|...

General Information:
Name(s) found: gi|15795133 [NCBI NR]
gi|15230659 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|15795133|dbj|BAB02511.1| transposase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15230659|ref|NP_187907.1| hAT dimerisation domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 572 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: protein dimerization activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASIVVNVHD YGTWVEDGAR VQCTFCDKRM NDFNRLKYHL GNVCKDVTPC SQVPLPIREA  60
   61 FFKMVMEQRY PDRKRGRSNK GFTASETAAE AEKLAQMDVA QFFYEHGVDF SAVDSTSFKK 120
  121 MMMIKTVGGE GGGQMIPDSR DLNGWMFQEA LKKVQDRVKE IKASWEITGC SILFDAWIGP 180
  181 KGRDLVTFVA DCPAGAVYLK SADVSDIKTD VTALTSLVNG IVEEVGVRNV TQIIACSTSG 240
  241 WVGDLGKQLA GQVFWSVSLS YCLKLMLVEI GKMYSFEDIF EKVKLLLDLI NNNPSFLYVF 300
  301 RENSHKVDVS SECEFVMPYL TLEHIYWVRR AGLFASPEWK KEQGIAISSF VNDSTFWESL 360
  361 DKIVGSTSSL VHGWLWFSRG SKHVAYAYHF IESIKKNVAW TFKYERQFYE PTWNVIDDVW 420
  421 HNNHNPLHAA GYFLNPMAYY SDDFHTYQHV YTGLAFSLVH LVKEPHLQVK IGTQLDVYRY 480
  481 GRGCFMKASQ AGQLNGVSPV NWWTQKANQY PELQNLAVKI LSQTSEGASR YKLKRSVAEK 540
  541 LLLTEGMSHC ERKHLEELAV VHYNLQLQSC KA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] FFAS03 1.01 Solution structure of two zf-C2H2 domains from human Zinc finger protein 512
    2 View Details [78..572] PSI-BLAST 36.154902 Three-dimensional structure of the Hermes DNA transposase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.304205134456748 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.722279828632226 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29272620969648 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.24934115119652 bayes_pls_golite062009
  • nuclease activity
    		•  0.239989310123501 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle