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Protein Overview: CLF_ARATH

General Information:
Name(s) found: CLF_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7484880|pir||T01127 curly leaf protein (polycomb-group) [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|3242729|gb|AAC23781.1| curly leaf protein (polycomb-group) [Arabidopsis thaliana] [NCBI NR]
  • gi|30912630|sp|P93831.2|CLF_ARATH RecName: Full=Histone-lysine N-methyltransferase CLF; AltName: Full=Polycomb group protein CURLY LEAF; AltName: Full=Protein INCURVATA 1; AltName: Full=Protein photoperiod insensitive flowering; AltName: Full=Protein SET [NCBI NR]
  • gi|15227824|ref|NP_179919.1| CLF (CURLY LEAF); transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Histone-lysine N-methyltransferase CLF OS=Arabidopsis thaliana GN=CLF PE=1 SV=2 [Swiss-Prot]
  • (P93831) Polycomb group protein CURLY LEAF [athaliana3702.FASTAC.txt]
  • curly leaf protein (polycomb-group) [Arabidopsis thaliana]gi|30912630|sp|P93831|CLF_ARATH Polycomb group protein CURLY LEAFgi|7484880|pir||T01127 curly leaf protein (polycomb-group) [imported] - Arabidopsis thalianagi|15227824|ref|NP_179919.1| curly le [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Polycomb group protein CURLY LEAF [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ICU1, SDG1, SET1, CLF | CLF (CURLY LEAF); transcription factor | chr2:9962650-9967197 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • curly leaf protein (polycomb-group) [imported] - Arabidopsis thaliana [nr-271106-contam.fasta]
  • CLF (CURLY LEAF); transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • curly leaf protein (polycomb-group) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Polycomb group protein CURLY LEAF (Protein INCURVATA 1) (Protein photoperiod insensitive flowering) (Protein SET DOMAIN GROUP 1) [nr-271106-contam.fasta]
  • | Symbols: CLF, ICU1, SDG1, SET1 | SET domain-containing protein | chr2:9955570-9960117 FORWARD LENGTH=902 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 902 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: DNA mediated transformation [IMP]
    regulation of gene expression by genetic imprinting [IMP]
    histone methylation [IMP]
    vegetative to reproductive phase transition of meristem [IMP]
    leaf morphogenesis [IMP]
    Molecular Function: transcription factor activity [ISS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASEASPSSS ATRSEPPKDS PAEERGPASK EVSEVIESLK KKLAADRCIS IKKRIDENKK  60
   61 NLFAITQSFM RSSMERGGSC KDGSDLLVKR QRDSPGMKSG IDESNNNRYV EDGPASSGMV 120
  121 QGSSVPVKIS LRPIKMPDIK RLSPYTTWVF LDRNQRMTED QSVVGRRRIY YDQTGGEALI 180
  181 CSDSEEEAID DEEEKRDFLE PEDYIIRMTL EQLGLSDSVL AELASFLSRS TSEIKARHGV 240
  241 LMKEKEVSES GDNQAESSLL NKDMEGALDS FDNLFCRRCL VFDCRLHGCS QDLIFPAEKP 300
  301 APWCPPVDEN LTCGANCYKT LLKSGRFPGY GTIEGKTGTS SDGAGTKTTP TKFSSKLNGR 360
  361 KPKTFPSESA SSNEKCALET SDSENGLQQD TNSDKVSSSP KVKGSGRRVG RKRNKNRVAE 420
  421 RVPRKTQKRQ KKTEASDSDS IASGSCSPSD AKHKDNEDAT SSSQKHVKSG NSGKSRKNGT 480
  481 PAEVSNNSVK DDVPVCQSNE VASELDAPGS DESLRKEEFM GETVSRGRLA TNKLWRPLEK 540
  541 SLFDKGVEIF GMNSCLIARN LLSGFKSCWE VFQYMTCSEN KASFFGGDGL NPDGSSKFDI 600
  601 NGNMVNNQVR RRSRFLRRRG KVRRLKYTWK SAAYHSIRKR ITEKKDQPCR QFNPCNCKIA 660
  661 CGKECPCLLN GTCCEKYCGC PKSCKNRFRG CHCAKSQCRS RQCPCFAADR ECDPDVCRNC 720
  721 WVIGGDGSLG VPSQRGDNYE CRNMKLLLKQ QQRVLLGISD VSGWGAFLKN SVSKHEYLGE 780
  781 YTGELISHKE ADKRGKIYDR ENCSFLFNLN DQFVLDAYRK GDKLKFANHS PEPNCYAKVI 840
  841 MVAGDHRVGI FAKERILAGE ELFYDYRYEP DRAPAWAKKP EAPGSKKDEN VTPSVGRPKK 900
  901 LA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..214] MSA 2.043994 View MSA. No confident structure predictions are available.
    2 View Details [215..289] deduced N/A No confident structure predictions are available.
    3 View Details [290..445] MSA 4.311997 View MSA. No confident structure predictions are available.
    4 View Details [446..550] MSA 1.325996 View MSA. No confident structure predictions are available.
    5 View Details [551..902] PSI-BLAST 56.69897 No description for 2r3aA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle