General Information: |
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Name(s) found: |
nhr-34 /
CE35565
[WormBase]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Caenorhabditis elegans |
Length: | 631 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[IEA]
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Biological Process: |
regulation of transcription, DNA-dependent
[IEA]
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Molecular Function: |
DNA binding
[IEA]
transcription factor activity [IEA] zinc ion binding [IEA] steroid hormone receptor activity [IEA] sequence-specific DNA binding [IEA] steroid binding [IEA] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MTDYCIFNIS WMSDRFGCET GNEDVQECID KSPNGSPTTS TTHRRQNSSS GLEPARKRPK 60 61 LSPPVLTAMP LDLTDAVSPN ESQACTSSLK GVVTAAGAAQ MSVADRMTSS SVAPPLCIVP 120 121 RSVEFINPKT EDMSMDIPMG NVQSEFTGLK CRVCGDSRAG RHYGTIACNG CKGFFRRSIW 180 181 EQRDYVCRFG GKCLVVQEYR NRCRACRLRK CFTVGMDARA VQSERDKHKK NPKDSNNEGS 240 241 TSPQYPTAST PISIPSTSTS QTPTSSVNSY NFQNIPGIVS RSFSENLIMR DNSVPVMETS 300 301 QSAALSHVPL VRYLIDLEKA TDNLIDENCD FMSMEFDQLC RVDVTIEAAF RQPGVVAKRT 360 361 PPRWLALERL TTLEDVHIAW CRSFVLCIDY AKIMKDYQEL SPTDQFTLLR NRVISVNWLC 420 421 HTYKTFKAGC DGVALVNGSW YPRDKELQKQ LDPGCNHYFR ILSEHLMEDL VIPMREMDMD 480 481 EGEFVILKAL ILFRAHRRLS EEGRAHIKRV RDKYIEALYQ HVQHQHRHFS SVQTSMRISK 540 541 ILLLLPSIEH LSQQEDDNVQ FLALFNLANL NGLPYELHSS IKQHIPNGDD SDDTQVNEVT 600 601 SNNDGPRSSE SSHTPQSVST SQFLEFKPSL H |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..140] | 8.361996 | View MSA. No confident structure predictions are available. | |
2 | View Details | [141..272] | 26.39794 | Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter | |
3 | View Details | [273..631] | 56.154902 | Crystal Structure of the RARbeta/RXRalpha Ligand Binding Domain Heterodimer in Complex with 9-cis Retinoic Acid and a Fragment of the TRAP220 Coactivator |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 | No functions predicted. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2 | No functions predicted. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3 |
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)