YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: pas-3

General Information:
Name(s) found: pas-3 / CE30307 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00003924 locus:pas-3 Proteasome subunit alpha type-4 status:Confirmed UniProt:Q9N599 protein_id:CCD66205.1 [WormBase]
  • gi|25143215|ref|NP_491520.2| Proteasome Alpha Subunit family member (pas-3) [Caenorhabditis elegans] [NCBI NR]
  • gi|18652622|gb|AAF60416.2| Proteasome alpha subunit protein 3 [Caenorhabditis elegans] [NCBI NR]
  • gi|12229924|sp|Q9N599.2|PSA4_CAEEL RecName: Full=Proteasome subunit alpha type-4; AltName: Full=Proteasome subunit alpha 3 [NCBI NR]
  • Proteasome subunit alpha type-4 OS=Caenorhabditis elegans GN=pas-3 PE=3 SV=2 [Swiss-Prot]
  • [wormpep79.fasta]
  • CE30307 WBGene00003924 locus:pas-3 endopeptidase status:Confirmed SW:Q9N599 protein_id:AAF60416.2 [wormpep150.fasta]
  • 30307 WBGene00003924 locus:pas-3 endopeptidase status:Confirmed SW:Q9N599 protein_id:AAF60416.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • proteasome Alpha Subunit (28.2 kD) (pas-3) [Caenorhabditis elegans]gi|18652622|gb|AAF60416.2| Proteasome alpha subunit protein 3 [Caenorhabditis elegans]gi|12229924|sp|Q9N599|PSA4_CAEEL Proteasome subunit alpha type 4 (Proteasome subunit alpha 3) [nrdb_11152004_Chlamydomonas]
  • locus:pas-3 endopeptidase status:Confirmed SW:Q9N599 protein_id:AAF60416.2 [wormpep115.fasta.reversed]
  • CE30307 locus:pas-3 endopeptidase status:Confirmed [wormpep80.hongbin]
  • CE30307 WBGene00003924 locus:pas-3 endopeptidase status:Confirmed UniProt:Q9N599 protein_id:AAF60416.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE30307 WBGene00003924 locus:pas-3 endopeptidase status:Confirmed UniProt:Q9N599 protein_id:AAF60416.2| [wormORF-contam.fasta]
  • Proteasome alpha subunit protein 3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y110A7A.14 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Proteasome subunit alpha type 4 (Proteasome subunit alpha 3) [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE30307 WBGene00003924 locus:pas-3 endopeptidase status:Confirmed UniProt:Q9N599 protein_id:CCD66205.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE30307 WBGene00003924 locus:pas-3 status:Confirmed UniProt:Q9N599 protein_id:CCD66205.1 Proteasome subunit alpha type-4 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 250 amino acids

    Gene Ontology:
    Cellular Component: proteasome core complex [IEALink to PubMed article]
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    ubiquitin-dependent protein catabolic process [IEALink to PubMed article]
    Molecular Function: endopeptidase activity [IEALink to PubMed article]
    threonine-type endopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRYDSRTT IFSPEGRLYQ VEYAMEAISH AGTCLGILSS EGIVVAAERK NVHKLLDDSV  60
   61 MTEKVYRLSD NISCTVAGIT ADANILINHL RWWAASYRNS YGEEMPVEQL VQNLCNEKQR 120
  121 YTQIGGKRPF GVSLLYIGWD KHYGYQLYQS DPSGNYTGWK ATCIGSNHQA AVTLLKQEYK 180
  181 SPNLEEAKQL AIKVLWKTLD VKLASEKVEM AVLTRRDGKT VLEELTTKEV DALIAEHEKK 240
  241 EKEAETAEKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..250] PSI-BLAST 62.522879 Proteasome alpha subunit (non-catalytic)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • endopeptidase activity
    		•  6.91642761177919 bayes_pls_golite062009
  • peptidase activity
    		•  6.84511694091156 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  6.5973571808298 bayes_pls_golite062009
  • hydrolase activity
    		•  4.47652590304822 bayes_pls_golite062009
  • threonine-type endopeptidase activity
    		•  2.98214579292788 bayes_pls_golite062009
  • threonine-type peptidase activity
    		•  2.98214579292788 bayes_pls_golite062009
  • binding
    		•  1.75265921676176 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.39216781236247 bayes_pls_golite062009
  • catalytic activity
    		•  1.19663085909195 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle