General Information: |
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Name(s) found: |
smn-1 /
CE27843
[WormBase]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Caenorhabditis elegans |
Length: | 207 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[IDA][IEA]
cytoplasm [IEA] |
Biological Process: |
locomotory behavior
[IMP]
nematode larval development [IMP] embryonic development ending in birth or egg hatching [IMP] positive regulation of growth rate [IMP] gamete generation [IMP] mRNA processing [IEA] spliceosome assembly [IEA] growth [IMP] |
Molecular Function: |
nucleic acid binding
[IEA]
RNA binding [IEA] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MAKIWSKSGD MEVDDVWDDT ELIKMYDESL QEISKNETSA KITSRKFKGE DGKMYTWKVG 60 61 GKCMAPYEEN GEVTDYPATI DTIGGADNLE VGVTFIYYGG QAVVQMKDLW LNEEAIADAV 120 121 KAENDLQKTK KTSTVNSVAH SNSKSTSSAP NTSMPFPSFA PPVPPNIIAM APVNQKEAMN 180 181 SMLMSWYMSG YHTGYYQALA DQKNVQN |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | hcp1 IP from december2004 | Cheeseman, I.M., et al. (2005) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..138] | 24.221849 | Survival motor neuron protein 1, smn | |
2 | View Details | [139..207] | 1.028993 | View MSA. No confident structure predictions are available. |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||
1 |
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2 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)