General Information: |
|
Name(s) found: |
CE27709
[WormBase]
|
Description(s) found:
Found 17 descriptions. SHOW ALL |
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Organism: | Caenorhabditis elegans |
Length: | 376 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[IEA]
|
Biological Process: |
morphogenesis of an epithelium
[IMP]
nematode larval development [IMP] embryonic development ending in birth or egg hatching [IMP] mRNA processing [IEA] growth [IMP] |
Molecular Function: |
nucleic acid binding
[IEA]
RNA binding [IEA] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSFFNPPANS NHGYNDDVNT GYNARMHSKL AEREGFHLGN GSDEPRTLYV GNLDSTVTED 60 61 FIATLFNQIG SVTKTKVIFD EMKVNWAVEP GQQQSKIDTT RHFHVFVGDL SSEVDNQKLR 120 121 EAFQPFGDVS DAKVIRDTNT TKSKGYGFVS YPKREEAERA IEQMNGQWLG RRTIRTNWAT 180 181 RKPGDQEKPS HYNEKSYDEI YNQTSGDNTS VYVGNIASLT EDEIRQGFAS FGRITEVRIF 240 241 KMQGYAFVKF DNKDAAAKAI VQMNNQDVGG QLVRCSWGKT GDTGKTPGGS YGYGYGNSSS 300 301 GGNSQPYSGY GGGGAYGGGQ GGGGHGGPGQ QQSNANSQYW QYYAQYYNNP QLMQQWSNYW 360 361 QQQGGAPQQQ NSGGHQ |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | No Comments | Cheeseman, I.M., et al. (2004) | |
View Run | hcp1 IP from december2004 | Cheeseman, I.M., et al. (2005) | |
View Run | hcp2 ip from december | Cheeseman, I.M., et al. (2005) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..94] | 3.44 | NMR solution structure of TcUBP1, a single RBD-unit from Trypanosoma cruzi | |
2 | View Details | [95..314] | 41.522879 | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) | |
3 | View Details | [315..376] | 1.447996 | View MSA. No confident structure predictions are available. |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||||||||
1 |
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2 |
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3 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)