YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gsy-1

General Information:
Name(s) found: gsy-1 / CE24302 [WormBase]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • WBGene00001793 locus:gsy-1 Probable glycogen [starch] synthase status:Confirmed UniProt:Q9U2D9 protein_id:CAB60373.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 672 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: glycogen biosynthetic process [IEALink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    Molecular Function: glycogen (starch) synthase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDHARMPRN LSSNKIAKTI AGEDLDEEEV LEMDAGQSAR EEGRFVFECA WEVANKVGGI  60
   61 YTVLRSKAQI STEELGDQYC MFGPMKDGKW RLEVDPIEPE NRTIRAAMKR FQADGFRCMY 120
  121 GRWLIEGYPK VILFDLGSGA VKMNEWKHEL FEQCKIGIPH EDIESNDAVI LGFMVALFLK 180
  181 HFRESVTSYT PLVVAHFHEW QAGVGLLMTR LWKLDIATVY TTHATLLGRH LCAGGADLYN 240
  241 NLDSFDLDAE AGKRKIYHQY CLERAACQTA HIFTTVSEIT GLEAEHFLCR KPDVLTPNGL 300
  301 NVVKFAALHE FQNLHAQNKE KINQFIRGHF HGHLDFDLDK TLYFFTAGRY EFSNKGGDMF 360
  361 IESLARLNHY LKTTSDPRHM GVTVVAFLIY PAPANSFNVE SLKGQAVTKQ LKEAVDRIKE 420
  421 KVGQRIFDIC LQGHLPEPEE LMSPADNILL KRCIMSLHNS SLPPICTHNM IRADDPVLES 480
  481 LRRTSLFNKP EDRVKVVFHP EFLSSVSPLI GLDYEDFVRG CHLGVFPSYY EPWGYTPAEC 540
  541 TVMGIPSVST NLSGFGCFMQ EHVEDHEQKG IYVIDRRHKA AEESVQELAQ VMYDFCGQSR 600
  601 RQRIILRNSN EGLSALLDWQ NLGVFYRDCR RLALERLHPD VDKIMRDNEG KVPSAATSRR 660
  661 PSIHSSDGED DE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..484] PSI-BLAST 54.39794 Crystal structure of the glycogen synthase from A. tumefaciens in complex with ADP
    2 View Details [485..672] PSI-BLAST 16.69897 No description for 2gejA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • glycogen phosphorylase activity
    		•  5.43556332287206 bayes_pls_golite062009
  • phosphorylase activity
    		•  4.4363209226962 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  3.70184884300914 bayes_pls_golite062009
  • catalytic activity
    		•  2.65148466065976 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  2.62403914335522 bayes_pls_golite062009
  • glucosyltransferase activity
    		•  2.48423599937201 bayes_pls_golite062009
  • UDP-glucosyltransferase activity
    		•  2.22592863643386 bayes_pls_golite062009
  • transferase activity
    		•  2.18054407163329 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  2.13085705769565 bayes_pls_golite062009
  • UDP-N-acetylglucosamine 2-epimerase activity
    		•  1.55280519670033 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.974556371594238 bayes_pls_golite062009
  • alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
    		•  0.849686864309466 bayes_pls_golite062009
  • carbohydrate phosphatase activity
    		•  0.78952375993773 bayes_pls_golite062009
  • binding
    		•  0.399722153246393 bayes_pls_golite062009
  • mannosyltransferase activity
    		•  0.253888301381021 bayes_pls_golite062009
  • protein binding
    		•  0.198267161626932 bayes_pls_golite062009
  • sugar binding
    		•  0.14686473522482 bayes_pls_golite062009
  • drug binding
    		•  0.102804615007901 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle