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Protein Overview: ppp-1

General Information:
Name(s) found: ppp-1 / CE23548 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00004090 locus:ppp-1 Probable translation initiation factor eIF-2B subunit gamma status:Confirmed UniProt:P80361 protein_id:CCD64613.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 404 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: glycogen biosynthetic process [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    extracellular polysaccharide biosynthetic process [IEALink to PubMed article]
    biosynthetic process [IEALink to PubMed article]
    positive regulation of multicellular organism growth [IMPLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: nucleotidyltransferase activity [IEALink to PubMed article]
    glucose-1-phosphate thymidylyltransferase activity [IEALink to PubMed article]
    glucose-1-phosphate adenylyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHEMQGILLC SGGGTRMPVL TRHVQKCLLP VVGVPMFLYP LSSLLRTGIT DIKIFVREVL  60
   61 QLTLEKEVKK SKLLEKYPAH IEYICVNQED FGTADLLKNH HSKITKDALI VSCDFISDAS 120
  121 LIPLVDFFRA TNSTLVALIA DTCVNAPAPG SKSKKPKATD VMAIVESTGQ LAFLCGDDDF 180
  181 DAPLVMEKSL KIFPSIKLTS KYNDCHVYAI RHKVLLNLSK SKHISSFKAD FVPLLIDKQF 240
  241 EPDSDIKCFA YRLPHENGFV TAHANTLGSY FEVNKAIQKS FTRLMEYRGN GKNFNYKTDK 300
  301 IAAHESRIEE SAEIDKDSVI KRSFISDNCR IGEKTKLKES IIAKGVVIGN GASISNSIIC 360
  361 DGVEIGENAD VTNCIVAKDQ KVPAKGKVQN EVVEDGEDEE WTDD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..404] PSI-BLAST 56.39794 N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain; N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity
    		•  2.17535315350752 bayes_pls_golite062009
  • catalytic activity
    		•  1.88676710996045 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.86990263440735 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.49149681135671 bayes_pls_golite062009
  • glucose binding
    		•  1.05456452815784 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  0.796949457473955 bayes_pls_golite062009
  • acyltransferase activity
    		•  0.741838450922005 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  0.717805296858439 bayes_pls_golite062009
  • binding
    		•  0.667238976803188 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  0.619458068514795 bayes_pls_golite062009
  • sugar binding
    		•  0.598232027709749 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.555398952276587 bayes_pls_golite062009
  • O-acyltransferase activity
    		•  0.319932817519902 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle