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Protein Overview: CE20571

General Information:
Name(s) found: CE20571 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00008151 Ribosomal RNA processing protein 1 homolog status:Confirmed UniProt:Q18674 protein_id:CAA93111.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 397 amino acids

    Gene Ontology:
    Cellular Component: preribosome, small subunit precursor [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    rRNA processing [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVDLASVEV VFAQKLACGE PATRQRALRV LHDWIRDQSA KKHFDDADLM RLCKGLHYVM  60
   61 WMQDKMILQE ELADRIGGLI NIFTSEEEKV RFVACFLKSL SKEWPHIDRW RMDKFLMEVR 120
  121 RMVRACFTHL AELKWKKDIR DEYWKVFQET TISTDKSFNE ALKFHFASIL LDELDAAGGL 180
  181 TKKQVTACLK PYIELLGNKD ISEYLFTSLY EEIFKTILQQ KSDLITAVEE GEEMDQGGIE 240
  241 FSYKEIGALL FEVGKQEHLN AKRRKKIYDL VKKFDKSSRG QDPLHFETPV PKERLTRHDY 300
  301 EEAEKKAIVL ANSFKQERKS SRKVKSQIKK RAREAAEAAR QENGDDVPDD EIAEVKKGNG 360
  361 KKTAVPKVKK GRPLLKAKGV GKKRMVGGLK RKAGKKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..134] MSA 4.063972 View MSA. No confident structure predictions are available.
    2 View Details [135..223] MSA 2.063991 View MSA. No confident structure predictions are available.
    3 View Details [224..397] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle