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Protein Overview: atf-7

General Information:
Name(s) found: atf-7 / CE19688 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00000223 locus:atf-7 status:Confirmed UniProt:Q17801 protein_id:CAA83680.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 460 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]
    protein dimerization activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVVTTTSMQ SDSKKRVQLM GDTTSPFSLD TPNPKLMFTP LDLPTTAELM QRCLAVNPFE  60
   61 AKFREANQKI SSGSMQPNTS GANQSLEALE ANGGSQFSGS NAGTMSDLLL KIPQASLQHS 120
  121 PGIFSNMLLN AGDSEGTTRE NLKTADISKL LSVAGDFSAQ APRTADVLNA VLDMHSDRLH 180
  181 TINYLNNKPD FSALLRSPSS SAPNSASVLT NAMAIPSTSG APFPGTTLLV PPKTVSSYHS 240
  241 PLGASSQPPS TQKSPADGSW DHINGEKQIK KEIPYFNDDA MMLMERSNMS SSGSDQDQSA 300
  301 DMSNAGSTAS TSTGNPVGRP QNGTPGRGRG RGRSTTADMQ PDERRNTILE RNKAAAVRYR 360
  361 KRKKEEHDDM MGRVQAMEAE KNQLLAIQTQ NQVLRRELER VTALLTERES RCVCLKGVPM 420
  421 SDEQHADHHH RNTNGMYSGS DMLNGLGQIN GMQLKLPKLQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..219] MSA 6.155992 View MSA. No confident structure predictions are available.
    2 View Details [220..333] deduced N/A No confident structure predictions are available.
    3 View Details [334..460] PSI-BLAST 14.0 Structure Of The DNA Binding Domains Of IRF3, ATF-2 and Jun Bound To DNA


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle