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Protein Overview: atf-6

General Information:
Name(s) found: atf-6 / CE17828 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00000222 locus:atf-6 status:Partially_confirmed UniProt:Q20435 protein_id:CAA92180.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 589 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]
    protein dimerization activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFDNTVHES NFDDLLHNPN FPPQFDQLEL DSLLYGTDES QESTSSSSFG FSDQNAGFRS  60
   61 RDGGSLGDSS SDSSPPLSCA NFTENDQEMW DFGFQSRSPF ENFEQQFGSP YQDDEVIAEP 120
  121 TNEFMNARYL REEPAKHLPM QQKRIITILP KQSQPVKRIV SRPIQKVYRV KESPGSQQQT 180
  181 YRVVQPLMPS PSQATQRQIK QMYYNEPVQE IHMQPKSGPL VRQVSEEPRY VPIAPTVDIK 240
  241 AEPQVFTSEQ NRKIRNRMYA QASRMRKKEA DEHMKMNLQE LLQENEILRT ENAALKQRLA 300
  301 FFEHEEPVVE VPQPFGRNQK KKRIIAAGSV LMMFGLFAVI SPFNVDNNLN INNQIMAISN 360
  361 ETSMVARHGR VITYEDSAPV AKIPTQQPIH NYPNSTQNDC DMYKLNATET IRVNNDIERW 420
  421 VQVHSFDNVP MKFSGGLLNK EAMRKFNYAQ KVKPASVYGP QTLAVQKKSE QAALRSRERT 480
  481 WKQLDLLKTG NNIQLDNEKI QRKRQDIDKI ASIVRQKGDT LYIMTLQDYV LLPSLIKGAN 540
  541 SVPKLSLLLP SVPMNGTLQD QYTLLRVDCE VTGTGQLTLS NKQLSYLMP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..232] MSA 5.226996 View MSA. No confident structure predictions are available.
    2 View Details [233..358] PSI-BLAST 8.154902 C/ebp beta
    3 View Details [359..527] MSA 1.076983 View MSA. No confident structure predictions are available.
    4 View Details [528..589] MSA 1.023981 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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