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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: atf-6
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFDNTVHES NFDDLLHNPN FPPQFDQLEL DSLLYGTDES QESTSSSSFG FSDQNAGFRS  60
   61 RDGGSLGDSS SDSSPPLSCA NFTENDQEMW DFGFQSRSPF ENFEQQFGSP YQDDEVIAEP 120
  121 TNEFMNARYL REEPAKHLPM QQKRIITILP KQSQPVKRIV SRPIQKVYRV KESPGSQQQT 180
  181 YRVVQPLMPS PSQATQRQIK QMYYNEPVQE IHMQPKSGPL VRQVSEEPRY VPIAPTVDIK 240
  241 AEPQVFTSEQ NRKIRNRMYA QASRMRKKEA DEHMKMNLQE LLQENEILRT ENAALKQRLA 300
  301 FFEHEEPVVE VPQPFGRNQK KKRIIAAGSV LMMFGLFAVI SPFNVDNNLN INNQIMAISN 360
  361 ETSMVARHGR VITYEDSAPV AKIPTQQPIH NYPNSTQNDC DMYKLNATET IRVNNDIERW 420
  421 VQVHSFDNVP MKFSGGLLNK EAMRKFNYAQ KVKPASVYGP QTLAVQKKSE QAALRSRERT 480
  481 WKQLDLLKTG NNIQLDNEKI QRKRQDIDKI ASIVRQKGDT LYIMTLQDYV LLPSLIKGAN 540
  541 SVPKLSLLLP SVPMNGTLQD QYTLLRVDCE VTGTGQLTLS NKQLSYLMP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle