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Protein Overview: CE11546

General Information:
Name(s) found: CE11546 [WormBase]
Description(s) found:
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  • WBGene00010336 acyl-CoA oxidase I status:Partially_confirmed UniProt:Q93839 protein_id:CAB03158.1 [WormBase]
  • pir||T23010 hypothetical protein F59F4.1 - Caenorhabditis elegans [NCBI NR]
  • gi|3877973|emb|CAB03158.1| C. elegans protein F59F4.1, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17568313|ref|NP_510603.1| hypothetical protein F59F4.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE11546 WBGene00010336 acyl-CoA oxidase I status:Partially_confirmed TR:Q93839 protein_id:CAB03158.1 [wormpep150.fasta]
  • 11546 WBGene00010336 acyl-CoA oxidase I status:Partially_confirmed TR:Q93839 protein_id:CAB03158.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • acyl-CoA oxidase family member (74.9 kD) (XQ454) [Caenorhabditis elegans]gi|3877973|emb|CAB03158.1| Hypothetical protein F59F4.1 [Caenorhabditis elegans]gi|7504800|pir||T23010 hypothetical protein F59F4.1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • acyl-CoA oxidase I status:Partially_confirmed TR:Q93839 protein_id:CAB03158.1 [wormpep115.fasta.reversed]
  • CE11546 acyl-CoA oxidase I status:Partially_confirmed TR:Q93839 protein_id:CAB03158.1 [wormpep80.hongbin]
  • CE11546 WBGene00010336 acyl-CoA oxidase I status:Partially_confirmed UniProt:Q93839_CAEEL protein_id:CAB03158.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE11546 WBGene00010336 acyl-CoA oxidase I status:Partially_confirmed UniProt:Q93839_CAEEL protein_id:CAB03158.1| [wormORF-contam.fasta]
  • F59F4.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F59F4.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE11546 WBGene00010336 acyl-CoA oxidase I status:Partially_confirmed UniProt:Q93839 protein_id:CAB03158.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 667 amino acids

    Gene Ontology:
    Cellular Component: peroxisome [IEALink to PubMed article]
    Biological Process: fatty acid beta-oxidation [IEALink to PubMed article]
    electron transport [IEALink to PubMed article]
    fatty acid metabolic process [IEALink to PubMed article]
    Molecular Function: acyl-CoA dehydrogenase activity [IEALink to PubMed article]
    acyl-CoA oxidase activity [IEALink to PubMed article]
    FAD binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRWIQPGDN VDITNERKKA TFDTERMSAW IHGGTEVMKR RREILDFVKS VDDFKDPVPT  60
   61 EFMSREERIL NNARKVVAMT NNTDQIDGSD FFGEGMYYQA LTMGRDLHAM SLHYVMFIPT 120
  121 LQGQTDDDQL DEWLTKTISR AVVGTYAQTE LGHGTNLSKL ETTATYDPAT EEFVMNSPTI 180
  181 TAAKWWPGGL GKSSNYAVVV AQLYTKGECK GPHPFIVQLR DEDTHYPLKG IRLGDIGPKL 240
  241 GINGNDNGFL LFDKVRIPRK ALLMRYAKVN PDGTYIAPAH SKLGYGTMVF VRSIMIKDQS 300
  301 TQLAAAATIA TRYAAVRRQG EITPGKGEVQ IIDYQTQQFR VFPQLARAFA FMAAATEIRD 360
  361 LYMTVTEQLT HGNTELLAEL HVLSSGLKSL VSWDTAQGIE QCRLACGGHG YSQASGFPEI 420
  421 YGYAVGGCTY EGENIVMLLQ VARFLMKAAE GVRKGTANLA DIGAYIGKPG RKTSRLTTHH 480
  481 HYTDADIVED LEHVARKQVF RAYDRLKKAQ EHLRPEDAWN SVSVELAKAS RWHVRLYLVK 540
  541 NLLHKVSIAP QDLKIVLFDV ARLYAYDIIT SSIGAFLEDG YMSSNQMNEV KEGIYKCLSN 600
  601 MRPNAVGLVD CWDYDDKELK SVLGRRDGNV YPALLQWAQN SQLNRSEVLP AYEKYLGPMM 660
  661 KDARSKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..667] PSI-BLAST 157.0 Peroxisomal acyl-CoA oxidase-II, domains 3 and 4; Peroxisomal acyl-CoA oxidase-II, domains 1 and 2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • acyl-CoA oxidase activity
    		•  7.85164875699474 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  7.69964776555327 bayes_pls_golite062009
  • acyl-CoA dehydrogenase activity
    		•  6.0252876667118 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
    		•  5.50948952617422 bayes_pls_golite062009
  • palmitoyl-CoA oxidase activity
    		•  5.41720462605663 bayes_pls_golite062009
  • oxidoreductase activity
    		•  3.99827953439804 bayes_pls_golite062009
  • catalytic activity
    		•  2.41506805547596 bayes_pls_golite062009
  • pristanoyl-CoA oxidase activity
    		•  2.26651221125135 bayes_pls_golite062009
  • long-chain-acyl-CoA dehydrogenase activity
    		•  0.13696326544237 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle