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Protein Overview: cdc-6

General Information:
Name(s) found: cdc-6 / CE08688 [WormBase]
Description(s) found:
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  • WBGene00000382 locus:cdc-6 status:Confirmed UniProt:P91155 protein_id:CCD65162.1 [WormBase]
  • pir||E87754 protein C43E11.10 [imported] - Caenorhabditis elegans [NCBI NR]
  • gi|17506005|ref|NP_491343.1| Cell Division Cycle related family member (cdc-6) [Caenorhabditis elegans] [NCBI NR]
  • gi|1703575|gb|AAB37629.1| Cell division cycle related protein 6 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE08688 WBGene00000382 locus:cdc-6 status:Partially_confirmed TR:P91155 protein_id:AAB37629.1 [wormpep150.fasta]
  • 08688 WBGene00000382 locus:cdc-6 status:Partially_confirmed TR:P91155 protein_id:AAB37629.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • cell Division Cycle related (57.7 kD) (cdc-6) [Caenorhabditis elegans]gi|1703575|gb|AAB37629.1| Cell division cycle related protein 6 [Caenorhabditis elegans]gi|25395256|pir||E87754 protein C43E11.10 [imported] - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • locus:cdc-6 status:Partially_confirmed TR:P91155 protein_id:AAB37629.1 [wormpep115.fasta.reversed]
  • CE08688 status:Partially_confirmed TR:P91155 protein_id:AAB37629.1 [wormpep80.hongbin]
  • CE08688 WBGene00000382 locus:cdc-6 status:Partially_confirmed UniProt:P91155_CAEEL protein_id:AAB37629.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE08688 WBGene00000382 locus:cdc-6 status:Partially_confirmed UniProt:P91155_CAEEL protein_id:AAB37629.1| [wormORF-contam.fasta]
  • Cell division cycle related protein 6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Cell Division Cycle related family member (cdc-6) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE08688 WBGene00000382 locus:cdc-6 status:Partially_confirmed UniProt:P91155 protein_id:AAB37629.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE08688 WBGene00000382 locus:cdc-6 status:Confirmed UniProt:P91155 protein_id:CCD65162.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Cell Division Cycle related OS=Caenorhabditis elegans GN=cdc-6 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 518 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    nucleolus [IDA]
    condensed nuclear chromosome [IDA]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: nucleotide binding [IEALink to PubMed article]
    nucleoside-triphosphatase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKSGSTRK SQRARDFEES EETEKPSLTR RKSSRLSTQS VPIEKKKTPS SKTTKRVPVS  60
   61 ERVFHEEVES SSEDELLPQT KMASEEKRKL LLSPGSSLAD RVEKLEISSP RARGRPRKAT 120
  121 NLKSQLTTPR TPEKQSRSRS GSQGTPEKKS RKESSSESDS EEIISTSSEG ALKGRREEFD 180
  181 SLKLWIMKSK ETNTSLSIYV SGQPGTGKTA TTMRVLKSLG KSVRSCIVNC ASTNTKSALF 240
  241 KTIFESLDLD GKPNEEIFEK HVKQFKTPLV LVLDEIDHLA NRKNAALYAA FQWPETLSRK 300
  301 IIILGIANSI DLTERLLPKL MLAKPPKRLV FEPYTKDDIV EILNDKMKNE ETSIDAKAIE 360
  361 LTARKVAAMS GDLRTALHIF KQQKSRMIPD DSKVPGTPVN GCREVLGIIN NVYSSPLARA 420
  421 RLPLQPRILL AVSLTLSANK KCTFDRNSLL RAYYKACEAL RMPALDDDEL HSAFQTLESQ 480
  481 SFVRQLNGGK LVLQVDAPTA KSAISDNAML DQIGLLQF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..518] PSI-BLAST 46.0 Crystal Structure Analysis of ClpB

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.868980401898271 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle