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Protein Overview: fsn-1

General Information:
Name(s) found: fsn-1 / CE01163 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00001499 locus:fsn-1 F-box\/SPRY domain-containing protein 1 status:Confirmed UniProt:Q18223 protein_id:CCD65729.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 332 amino acids

    Gene Ontology:
    Cellular Component: neuron projection [IDALink to PubMed article]
    Biological Process: reproduction [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAENDGETIV PDEQCNLTAS TPMKSSGLEQ VESPKERKTS MVECDDEGNP SSGTPDESPK  60
   61 QLTPHSIPPR RRRSPRRPEV SASRLPLKVL NQIFQYLPLK DLRSAMLTCH SWNNALSMED 120
  121 SDIWQYLLGK KLPEAAVSDP FLLAELGSAK KKLRAWYFAW NTSDISRNNY IRTNGFTVHR 180
  181 QPVAQSTDGV RGKRGISKGV HAFDITWDGP LGTVAVVGIA TKHAALHCVG YVALLGSDDQ 240
  241 SWGWNLVDNV LMHNGAQLGV YPKMNNPPKY EVGDKIRLII DCDTHVAYFE RNSEFLGIAF 300
  301 NHIPPLRLYP AVCAVYGNTE VTMVYVGSPQ MG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] PSI-BLAST 4.0 Skp2; Cyclin A/CDK2-associated p19, Skp2
    2 View Details [152..332] PSI-BLAST 29.522879 No description for 2ihsA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.49960529341364 bayes_pls_golite062009
  • protein binding
    		•  0.501917973797597 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle