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Protein Overview: CE00906

General Information:
Name(s) found: CE00906 [WormBase]
Description(s) found:
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  • WBGene00007580 status:Partially_confirmed TR:Q17966 protein_id:CAA85490.1 [WormBase]
  • pir||T19269 hypothetical protein C14B1.9 - Caenorhabditis elegans [NCBI NR]
  • gi|3874293|emb|CAA85490.1| Hypothetical protein C14B1.9 [Caenorhabditis elegans] [NCBI NR]
  • gi|17552174|ref|NP_497755.1| hypothetical protein C14B1.9 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE00906 WBGene00007580 status:Partially_confirmed TR:Q17966 protein_id:CAA85490.1 [wormpep150.fasta]
  • 00906 WBGene00007580 status:Partially_confirmed TR:Q17966 protein_id:CAA85490.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative nuclear protein, with a coiled coil-4 domain (3E814) [Caenorhabditis elegans]gi|3874293|emb|CAA85490.1| Hypothetical protein C14B1.9 [Caenorhabditis elegans]gi|7495979|pir||T19269 hypothetical protein C14B1.9 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q17966 protein_id:CAA85490.1 [wormpep115.fasta.reversed]
  • CE00906 status:Partially_confirmed TR:Q17966 protein_id:CAA85490.1 [wormpep80.hongbin]
  • CE00906 WBGene00007580 status:Partially_confirmed UniProt:Q17966_CAEEL protein_id:CAA85490.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • C. elegans protein C14B1.9, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • CE00906 WBGene00007580 status:Partially_confirmed UniProt:Q17966_CAEEL protein_id:CAA85490.1| [wormORF-contam.fasta]
  • C14B1.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C14B1.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 558 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLCFYSVTV LLIIGIDSDP TIHDIANDSA NIVTKILGSF QGTSSMNLTK LFTSFDMPSC  60
   61 LRRCMPALDN IGALFDAAKN PETMKAMCRD MTEASKCATA AGCDKIFIGA ISNAFQFVCM 120
  121 DNLEKVSSQI ACIQENAGDL QQECESECAV QADVLDNAVK NTANQLFNME KICNSTTCIA 180
  181 NCYQDNIHKF CDIGEDNLLD TIFSQFEALQ EQPGILGYVK KVENNNKTGI SKLFGLMLPD 240
  241 GCNDKKMQFK IPKKISLDKP KSVGSPSNAH NEIPSQKNSP KSAVKNETDT EDALMAKSGN 300
  301 LSTAAVMFKN KVHTLQCQFL DSHGNPQNTP DFETLSKILS EHFDKKELTT TSKPDAKIPE 360
  361 SKTRACREAE SNDPQSRNSG ATAIISTVSC LVALNIIMSG VYNNSGSRMR SKNFEKHQVP 420
  421 SDMAFFQKFR KQSHSNETVD CKKKQEERVR EPPAQEKIKT PEKISCDPSE VREDAEDGSE 480
  481 IQPVKSAGRI PFVKLMPSRN ELEWEDAGSQ TDHSDVSDGH YSDETVEEKH NREHRNKTKA 540
  541 DNRTRRIAEI RRKHNINA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..223] deduced N/A No confident structure predictions are available.
    2 View Details [224..349] deduced N/A No confident structure predictions are available.
    3 View Details [350..558] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle