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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE00906
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.41
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLCFYSVTV LLIIGIDSDP TIHDIANDSA NIVTKILGSF QGTSSMNLTK LFTSFDMPSC  60
   61 LRRCMPALDN IGALFDAAKN PETMKAMCRD MTEASKCATA AGCDKIFIGA ISNAFQFVCM 120
  121 DNLEKVSSQI ACIQENAGDL QQECESECAV QADVLDNAVK NTANQLFNME KICNSTTCIA 180
  181 NCYQDNIHKF CDIGEDNLLD TIFSQFEALQ EQPGILGYVK KVENNNKTGI SKLFGLMLPD 240
  241 GCNDKKMQFK IPKKISLDKP KSVGSPSNAH NEIPSQKNSP KSAVKNETDT EDALMAKSGN 300
  301 LSTAAVMFKN KVHTLQCQFL DSHGNPQNTP DFETLSKILS EHFDKKELTT TSKPDAKIPE 360
  361 SKTRACREAE SNDPQSRNSG ATAIISTVSC LVALNIIMSG VYNNSGSRMR SKNFEKHQVP 420
  421 SDMAFFQKFR KQSHSNETVD CKKKQEERVR EPPAQEKIKT PEKISCDPSE VREDAEDGSE 480
  481 IQPVKSAGRI PFVKLMPSRN ELEWEDAGSQ TDHSDVSDGH YSDETVEEKH NREHRNKTKA 540
  541 DNRTRRIAEI RRKHNINA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle