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Protein Overview: pca1 (reserved)

General Information:
Name(s) found: pca1 (reserved) / SPCC1840.04 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • caspase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 425 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: apoptosis [IEA]
    cellular response to stress [IMPLink to PubMed article]
    proteolysis involved in cellular protein catabolic process [NAS]
    Molecular Function: cysteine-type endopeptidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYNSNPYNG GQYPPYNTYT RPNYSPNNGS QSNNTVHQYQ PPRMPPPSTR PQTDGNSNQI  60
   61 PMENVGHISL SSANSHAYAP PSGPPPNTGA NSYGNPNYSG PQLPNTQTQS YNLAGGGNFQ 120
  121 YQYSTCQGKR KALLIGINYL NTQNELQGCI NDVMSMSQLL IQRYGYKQED MVIMTDTASN 180
  181 QRAIPTRQNM LDAMRWLVSD AQPNDALFFH YSGHGGQTKD LDGDEVDGYD ETIYPLDHQY 240
  241 AGQIIDDEMH EIMVKPLPAG CRLTALFDSC HSGGALDLPF TYSTKGVLKE PNMLKESGMD 300
  301 VLHAGLSYAS GDIMGAINNV KNIFTSATNG FNNNALQYSR QVKFSPADVI SLSGCKDNQT 360
  361 SADTSVNGFA TGALSYAFRE VVTQNPQLSY LQLLRGIRQV LSNKYSQLPQ LSCSHPLDMN 420
  421 LAMVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] PSI-BLAST 6.221849 Sec24
    2 View Details [141..425] FFAS03 3.74 Caspase-9

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • peptidase activity
    		•  3.1899507591953 bayes_pls_golite062009
  • binding
    		•  2.22924561610124 bayes_pls_golite062009
  • hydrolase activity
    		•  2.12972595354571 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  2.11446327232186 bayes_pls_golite062009
  • endopeptidase activity
    		•  1.925193622235 bayes_pls_golite062009
  • cysteine-type peptidase activity
    		•  1.92343694153446 bayes_pls_golite062009
  • protein binding
    		•  1.52087463248142 bayes_pls_golite062009
  • cysteine-type endopeptidase activity
    		•  1.35765607557567 bayes_pls_golite062009
  • catalytic activity
    		•  0.976874866811795 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle