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Protein Overview: sap114

General Information:
Name(s) found: sap114 / SPAC22A12.09c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • splicing factor Sap114 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 481 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    spliceosomal complex [ICLink to PubMed article]
    U2 snRNP [ISSLink to PubMed article]
    Biological Process: nuclear mRNA splicing, via spliceosome [ISSLink to PubMed article]
    Molecular Function: RNA binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLMEFQDR NTTNNETEHQ KSITDQSSSV PAGVILPPPA IREIIDKSAS YVARNGPAFE  60
   61 EKIRQNEQAN TKFAFLHAND PYHPYYQHKL TEAREGKLKS HATGLSTQKT STLARPIQKP 120
  121 IEATIPAPSP YLFSEPLPSI SSLDLDVLRL TARYAAVRGS SFLVSLSQKE WNNTQFDFLK 180
  181 PNNALYPYFM RIVQQYTSLI REPISSPEQE LRENVRDPYS LLSKIQPRVR WQSHMESQKK 240
  241 KQKEEAEKEK LEYAQIDWND FVVVEVIQFT KSDEHAKLAK PTNLADLQTA TLEQKSAMFT 300
  301 MPDQNYTIEE APPTAEPWEP ISAPKKQEFG VSLPPSLASP EKGGISSTTS VSPAAQASPV 360
  361 LSTTTQPKVQ KPVPKAFQPK VPMEISPFSG ELVPATELEE HMRLKLLDPR WQEQRKVEES 420
  421 RKSTLNLENV NVAANMKRLV SQRTDLFDVQ NGVEISQEEI ERRKRAATQS AWGATPTNKR 480
  481 R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run ste13 No Comments Unpublished Data

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] PSI-BLAST 19.69897 No description for 2dt6A was found.
    2 View Details [113..254] PSI-BLAST 27.39794 No description for 2dt7B was found.
    3 View Details [255..481] MSA 2.058972 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle