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View Structure Prediction Details

Protein: sap114
Organism: Schizosaccharomyces pombe
Length: 481 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sap114.

Description E-value Query
Range
Subject
Range
gi|7527720, gi|2... - gi|7527720|gb|AAF63169.1|AC010657_5 T5E21.13 [Arabidopsis thaliana], pir||G86280 protein T5E21.13 [i...
468.0 [0..4] [472..1025]
gi|86196674, gi|... - gi|86196674|gb|EAQ71312.1| hypothetical protein MGCH7_ch7g719 [Magnaporthe grisea 70-15], gi|1492104...
463.0 [0..26] [473..13]
gi|34878996, gi|... - gi|34878996|ref|XP_223566.2| PREDICTED: similar to Splicing factor 3 subunit 1 (SF3a120) [Rattus nor...
461.0 [0..13] [468..21]
gi|26326219, gi|... - gi|34576561|ref|NP_080451.3| splicing factor 3a, subunit 1 [Mus musculus], gi|26326219|dbj|BAC26853....
461.0 [0..11] [468..18]
gi|55244637, gi|... - gi|58376969|ref|XP_309321.2| ENSANGP00000008201 [Anopheles gambiae str. PEST], gi|55244637|gb|EAA051...
459.0 [0..28] [465..1]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLMEFQDR NTTNNETEHQ KSITDQSSSV PAGVILPPPA IREIIDKSAS YVARNGPAFE  60
   61 EKIRQNEQAN TKFAFLHAND PYHPYYQHKL TEAREGKLKS HATGLSTQKT ST

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.69897
Match: 2dt6A
Description: No description for 2dt6A was found.

Predicted Domain #2
Region A:
Residues: [113-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LARPIQKPIE ATIPAPSPYL FSEPLPSISS LDLDVLRLTA RYAAVRGSSF LVSLSQKEWN  60
   61 NTQFDFLKPN NALYPYFMRI VQQYTSLIRE PISSPEQELR ENVRDPYSLL SKIQPRVRWQ 120
  121 SHMESQKKKQ KEEAEKEKLE YA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.39794
Match: 2dt7B
Description: No description for 2dt7B was found.

Predicted Domain #3
Region A:
Residues: [255-481]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QIDWNDFVVV EVIQFTKSDE HAKLAKPTNL ADLQTATLEQ KSAMFTMPDQ NYTIEEAPPT  60
   61 AEPWEPISAP KKQEFGVSLP PSLASPEKGG ISSTTSVSPA AQASPVLSTT TQPKVQKPVP 120
  121 KAFQPKVPME ISPFSGELVP ATELEEHMRL KLLDPRWQEQ RKVEESRKST LNLENVNVAA 180
  181 NMKRLVSQRT DLFDVQNGVE ISQEEIERRK RAATQSAWGA TPTNKRR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle