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Protein Overview: SPBC119.05c

General Information:
Name(s) found: SPBC119.05c [Sanger Pombe]
Description(s) found:
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  • gi|59799259|sp|O43125.1|CSH3_SCHPO RecName: Full=Protein csh3 [NCBI NR]
  • gi|2959366|emb|CAA17920.1| Wiskott-Aldrich syndrome homolog binding protein Lsb1 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|2951781|dbj|BAA25107.1| CSH3 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112078|ref|NP_595286.1| Wiskott-Aldrich syndrome homolog binding protein Lsb1 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|11359036|pir||T43336 csh3 protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • Wiskott-Aldrich syndrome homolog binding protein Lsb1 [Sanger Pombe]
  • Protein csh3 OS=Schizosaccharomyces pombe GN=csh3 PE=2 SV=1 [Swiss-Prot]
  • SH3 SRC HOMOLOGY DOMAIN PROTEIN: O43125; [pompepVF.fasta]
  • SH3 DOMAIN CONTAINING PROTEIN: O43125; [pompepV13]
  • Hypothetical 31.7 kDa protein C119.05C in chromosome II [pompep4896]
  • |csh3||src (SH3) homology domain [pompepnew.fasta]
  • |csh3||src (SH3) homology domain|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • |csh3||src |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • SH3 domain containing protein [Schizosaccharomyces pombe]gi|2959366|emb|CAA17920.1| csh3 [Schizosaccharomyces pombe]gi|11359036|pir||T43336 csh3 protein - fission yeast (Schizosaccharomyces pombe)gi|2951781|dbj|BAA25107.1| CSH3 [Schizosaccharomyces pom [nrdb_11152004_Chlamydomonas]
  • (O43125) Hypothetical 31.7 kDa protein C119.05C in chromosome II [pompep4896_normal_reversed]
  • |||Wiskott-Aldrich syndrome homolog binding protein Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBC119.05c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Protein csh3 [nr-271106-contam.fasta]
  • SPBC119.05c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • CSH3 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Protein csh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=csh3 PE=2 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 296 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: actin cytoskeleton organization [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHKNYLNHV IRGIYNDFQF LVDEGVVERS ALDWVHANIH LQDGPASPVT APAAQPVESS  60
   61 VPLPLPKRKS SVEKRAGSVA SAVAAMSLSQ NSGEKRTPEE PRKLPGVPAP QKQSEASSVN 120
  121 SSTEKLPPPP SYPGPNTAHK NVERVLAMYD FPGPDAGDLG FHAGEVIIVL EHVNNDWWRG 180
  181 ELNGKEGIFP SNYVRLLEDS AVKAQPPPPP PQQNYPPAAS SSAPPMQYQQ TAYPPQQAPY 240
  241 PPVQAYPQAP QQPIVVAQPT EHKHSSTFKK IGSGLGSAFV FGAGATAGAD LVNSIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..296] PSI-BLAST 30.30103 No description for 2h8hA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  2.29371158534719 bayes_pls_golite062009
  • binding
    		•  2.28128893430792 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.02807082768447 bayes_pls_golite062009
  • actin binding
    		•  1.61769239689139 bayes_pls_golite062009
  • actin filament binding
    		•  0.81415274660559 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle