YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: nup85

General Information:
Name(s) found: nup85 / SPBC17G9.04c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • nucleoporin Nup85 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 675 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDALink to PubMed article]
    nucleus [IDALink to PubMed article]
    nuclear membrane [IDALink to PubMed article]
    Nup107-160 complex [IDALink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    nuclear pore [IDALink to PubMed article][TASLink to PubMed article]
    Biological Process: nucleocytoplasmic transport [TASLink to PubMed article]
    rRNA export from nucleus [ISS]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSDEVDLP VYHLQNAPIE NGKLNDWRSK GRTVAFKLHP FLRKGLAYIN NKEFDENTLK  60
   61 SDKFEEVESL VYEFSTPSTL IEPNYLLTAW HELWEELQDT YMTPILDSEA NLLLLTQFYG 120
  121 KISSLFRSKI IQVLEELQSR INEGEKDCQP VLDSLWEVES AWRCAEAIYF PPSSPYTLST 180
  181 GILDWVNAYD PQPIADDGLE IMAYRIPYQH PEFWPYVNKT AIRGLFEQTI SCLEMSGLTK 240
  241 EWPVLKETVD ELIDILRYSP CTHQKRIRSV SDFERRWKLW RSRLANLRHV VKKHRDIDSE 300
  301 VLDDFVVLLD ILNGNKEVIM LSCAHWQEYF SALAFLYGPL DCKNPEDISL LYQLATGEDS 360
  361 KFYVNGTIEY EQICVNLCSN EPLNAIKHAY LLDLGLAVHL ADLLSKSGHL RDYITEEYPI 420
  421 TLREHLILEY GQCVLESRNL WQTSFAYWKC VADSGYQRIK ACIPYVPLSD VDAKETALQL 480
  481 CKQLKLRDEA QLVLTHWADE LIARNHYGEA LIALDNAANY SALNRVTWEL FDICIAEKKS 540
  541 FSPDKDELLY ELFSSPKACT PTLASIISPA ATIHQYFFYL QHKKELNASE LLVGLLTMVD 600
  601 FPSSRFPKLL ELLHEFLNNP LQSNSTDFKL SLVNVYDCIA VLQDQQSTVK DQQLLLSIHE 660
  661 RLSSAISWYF LHLKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] deduced N/A No confident structure predictions are available.
    2 View Details [78..675] FFAS03 1.3 No description for 2qx5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle