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Protein Overview: SPBC1861.08c

General Information:
Name(s) found: SPBC1861.08c [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • U2 snRNP-associated protein Lea1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 239 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    spliceosomal complex [RCALink to PubMed article]
    protein complex [RCALink to PubMed article]
    U2 snRNP [ISSLink to PubMed article]
    Biological Process: RNA splicing, via transesterification reactions [ISSLink to PubMed article]
    nuclear mRNA splicing, via spliceosome [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLNAEFLSQ VPSFISPLKE TELDLRWYQI PIIENLGVLR DVHDAIDFTD NDIRYLGNFP  60
   61 RMKRLQTLLC GNNRITAIAP DIGKVLPNLK TLSLAQNHLQ EIADLDPLAS CPQLTNLSCI 120
  121 DNPVAQKQYY RLYLIWRIPS LHILDFERVR RNERLRAEEV FGQIQNPTEI ASSIMGVKSR 180
  181 VFDLAALVQS HPEANSPITT GYTLTPEERE KIKEAIKNAS SIAEINRLEA MLLEGKIPK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..64] PSI-BLAST 16.522879 Splicesomal U2A' protein
    2 View Details [65..239] PSI-BLAST 5.522879 Skp2; Cyclin A/CDK2-associated p19, Skp2


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle