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Protein Overview: kms1

General Information:
Name(s) found: kms1 / SPAC3A11.05c [Sanger Pombe]
Description(s) found:
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  • gi|2414633|emb|CAB16381.1| meiotic spindle pole body protein Kms1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|2199498|dbj|BAA20460.1| kms1+ [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19115110|ref|NP_594198.1| meiotic spindle pole body protein Kms1 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|12230252|sp|P87245.1|KMS1_SCHPO RecName: Full=Karyogamy meiotic segregation protein 1 [NCBI NR]
  • pir||T43222 meiosis specific protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • meiotic spindle pole body protein Kms1 [Sanger Pombe]
  • Karyogamy meiotic segregation protein 1 OS=Schizosaccharomyces pombe GN=kms1 PE=1 SV=1 [Swiss-Prot]
  • MEIOSIS SPECIFIC PROTEIN; MUTANT DISPLAYS DECREASED MEIOTIC RECOMBINATION; PUTATIVE SPINDLE POLE BODY COMPONENT: P87245; [pompepVF.fasta]
  • KMS1 MEIOSIS SPECIFIC PROTEIN; MUTANT DISPLAYS DECREASED MEIOTIC RECOMBINATION; PUTATIVE SPINDLE POLE BODY COMPONENT: P87245; [pompepV13]
  • Karyogamy meiotic segregation protein 1 [pompep4896]
  • |kms1||meiosis specific protein [pompepnew.fasta]
  • |kms1||meiosis specific protein|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • kms1 meiosis specific protein [Schizosaccharomyces pombe]gi|2414633|emb|CAB16381.1| kms1 [Schizosaccharomyces pombe]gi|12230252|sp|P87245|KMS1_SCHPO Karyogamy meiotic segregation protein 1gi|11359196|pir||T43222 meiosis specific protein - fission yeast [nrdb_11152004_Chlamydomonas]
  • (P87245) Karyogamy meiotic segregation protein 1 [pompep4896_normal_reversed]
  • |kms1||meiotic spindle pole body protein Kms1|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPAC3A11.05c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC3A11.05c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • kms1+ [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Karyogamy meiotic segregation protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=kms1 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 607 amino acids

    Gene Ontology:
    Cellular Component: nuclear membrane [ICLink to PubMed article]
    membrane [ISSLink to PubMed article]
    spindle pole body [IDALink to PubMed articleLink to PubMed article]
    SUN-KASH complex [IPILink to PubMed article]
    Biological Process: meiotic telomere clustering [IMPLink to PubMed article]
    reciprocal meiotic recombination [IMPLink to PubMed article]
    karyogamy involved in conjugation with cellular fusion [IMPLink to PubMed article]
    nucleus organization [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNERDFDLI FDSYDFKHEG KVHLSNFLPI INDLQLLHPA SAPPLLSEFQ KQCTLEFVRQ  60
   61 NADLSITKDN FRDVYKKLTE NEDDSFANQA EKPSMEQQNS KNSIKEDANE HSVNSAHSKS 120
  121 SSNASPESLN PSQMMSKRLS LPPMSQFTDS DFVNILRTPF AQSTPLNRNT SSRNTEMPLV 180
  181 RKDKPDFSNG HHDLIKQITE LQDMLDKARD QARKKSRTVD ILEGKVNELT HQLNMADSKY 240
  241 NESKVANNSQ NNQIKTLKAQ NLNIHKNFQK IQSELIQTNS GLYSTKKELS ALQVRYATLL 300
  301 RKFTDQTKKI EELSLAASRS SENENTIRRL ALENHELKNS NNQLNNHIDD LTREKHLIAL 360
  361 SNNPKGDEFL SPSNLDEMVY SKEVGLSFTQ PSVCISIPAV GMRESEELRE LEFKCKQQKK 420
  421 TIEECKHISQ SLQSSLTAES SRNKELVAGF LMLSEEIGIQ KWIIQSLSKM SPTLNDFCRR 480
  481 YDSSMPTYEE SSHECTVLSS FSDDETGLMA TNTTMNNSSK DFMASQDTVN ADNPHFLATK 540
  541 GQPLLLLSVM KSNILRLFYV LFLFACFYGL DYILCAELLQ AFLRVVFTFC EHIIILLYGR 600
  601 YELVQPS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..346] PSI-BLAST 19.522879 Heavy meromyosin subfragment
    2 View Details [347..512] PSI-BLAST 9.0 Tropomyosin
    3 View Details [513..607] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle